Gene Smal_3117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3117 
Symbol 
ID6476017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3486887 
End bp3487705 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content66% 
IMG OID642732313 
Producttol-pal system protein YbgF 
Protein accessionYP_002029499 
Protein GI194366889 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.35815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.68716 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATTG GCATCAAACT GATGCTGGTC GTTGCGGCAG CCCTCGTGGC TGCCGCACCG 
GCGCATGCAC AGCGACAGAG TCTGGCCGAC CGTGTCGGCG CGATCGAGCA GCAGATGTAC
AACAACAGTG CCAACCAGGA CCTGTTGAAC CAGATCAACC AGCTGCGGCA GCAGGTCACC
AGCCTGCAGG CCTCGATCGA GCAGTTGCAG CACGACAACG CCCAGCTCAA GCAGTCCGCC
CAGGACCAGT ACCTGGATCT GGACAGCCGC CTGAACCGGT TGGAAGGGGG TAATGCCGCC
CCGGCCCTGC CGCCCGTTCC GGCGAGCACG CCGAAGGCCG CTCCGGCCCC GGCAAAACCC
GCGACGGCGG CCACTTCCGA GCGGCCGCCT TCCGTCCATG GTGATGCCGG CAGCCTTGCC
GCCACCGGCG ACGAGCGCAC CACCTACAAC GTCGCCTTCG ATTCGTTGAA GGCCGGCAAG
TACGATGATT CGGCGCAGCT GTTCCTGAGC TTCCTGCAGC TGTACCCGAA CGGCGTCTAC
GCGCCGAACG CGCTGTACTG GCTGGGCGAG AGCTATTACG CCACCCGCAA TTTCCCGATG
GCCGAGACCC AGTTCCGTGA ACTGCTCTCA CGCTATCCGA CCCACGACAA GGCCGCTGGC
GGCCTGCTCA AGGTTGGCCT CTCGCAGTAC GGCGAGGGCA AGGTCGACCA GGCCCAGCAG
ACGCTGGAGA CCGTCGTGGC GCAGTACCCC GGCTCGGACG CCGCGCGCAC CGCGCAGGAC
CGCCTGCAGT CGATCCGCCT CGGCAAGCAG ATCCGCTGA
 
Protein sequence
MRIGIKLMLV VAAALVAAAP AHAQRQSLAD RVGAIEQQMY NNSANQDLLN QINQLRQQVT 
SLQASIEQLQ HDNAQLKQSA QDQYLDLDSR LNRLEGGNAA PALPPVPAST PKAAPAPAKP
ATAATSERPP SVHGDAGSLA ATGDERTTYN VAFDSLKAGK YDDSAQLFLS FLQLYPNGVY
APNALYWLGE SYYATRNFPM AETQFRELLS RYPTHDKAAG GLLKVGLSQY GEGKVDQAQQ
TLETVVAQYP GSDAARTAQD RLQSIRLGKQ IR