| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3103 |
|---|
| Symbol | |
|---|
| ID | 6476002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 3473625 |
|---|
| End bp | 3475430 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642732298 |
|---|
| Product | ATP-dependent DNA helicase RecQ |
|---|
| Protein accession | YP_002029485 |
|---|
| Protein GI | 194366875 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.69477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCCC GTCCCGCGCA CGACCTGCTC CAACGCGTCT TTGGTTACGA CGATTTCCGT
GGTCCCCAGC AGGACATCGT GGAGCATGTG GCTGCCGGTC ACGATGCCCT GGTGCTGATG
CCCACCGGCG GCGGCAAGTC GCTGTGCTAC CAGGTCCCGG CCCTGCTGCG TGACGGATGT
GGCATCGTCA TCTCGCCGTT GATCGCCTTG ATGCAGGATC AGGTCGAAGC CCTGCGCCAG
CTCGGCGTGC GTGCCGAGTA CCTGAATTCC ACCCTGGATG CCGAGACCGC CGGCCGCGTC
GAGCGCGAAC TGCTCGCCGG CGAGCTGGAC ATGCTCTATG TCGCTCCCGA GCGCCTGCTG
ACCGGTCGCT TCCTGTCGCT GCTGTCGCGC AGCCGCATCG CCCTGTTCGC CATCGACGAA
GCGCACTGCG TGTCGCAGTG GGGCCACGAC TTCCGCCCGG AATACCGCCA GCTGACCGTG
CTGCACGAGC GCTGGCCGGA GATTCCGCGG ATCGCGCTGA CCGCCACCGC AGACCCGCCA
ACCCAGCGTG AGATCGCCGA GCGGCTGGAC CTGCAGGAAG CACGCCACTT CGTCAGCTCG
TTCGACCGCC CCAACATCCG CTACACCGTG GTGCAGAAGG ACAACGCCCG CAAGCAGCTG
GGTGACTTCC TGCGCAGCCA TCGCAGCGAA GCCGGCATCG TCTACTGCAT GTCGCGTCGC
AAAGTGGAAG AAACCGCCGA ATTCCTCTGC ACACAGGGCT TCAACGCCCT GCCCTACCAT
GCCGGCCTGC CGTCGGAGGT GCGCGCCAAC AACCAGCGCC GCTTCCTGCG CGAGGACGGC
ATCGTGATGT GCGCCACCAT CGCCTTCGGC ATGGGCATCG ACAAGCCGGA CGTGCGCTTC
GTGGCGCATA CCGACCTGCC CAAGTCGATG GAAGGCTACT ACCAGGAAAC CGGCCGCGCC
GGCCGTGATG GCGAAGCCGC CGAGGCCTGG CTGTGCTACG GGTTGGGCGA TGTGGTCCTG
CTCAAGCAGA TGATCGAGCA GTCCGAGGCC GGCGAAGAAC GCAAGCAGCT GGAACGGGGC
AAGCTCGACC ACCTGCTGGG CTACTGCGAA TCCATGCAGT GCCGCCGCCA GGTGCTGCTG
GCCGGATTCG GTGAAACCTA CCCCAAGCCC TGCGGCAACT GCGACAACTG CCTGACGCCG
CCAGCGTCGT GGGACGCGAC CATTCCTGCC CAGAAGGCGC TCAGCTGCGT GTACCGCAGT
GGCCAGCGTT TCGGCGTCGG CCACCTGATC GATGTCCTGC GCGGCAGCGA GAACGAGAAA
GTGAGGCAGC AGGGCCACGA CAAGCTCAGC ACCTACGCGA TCGGCCGCGA CCTCGACGCG
CGCACCTGGC GCAGCGTGTT CCGCCAGCTG GTGGCCGCCA GCCTGCTGGA AGTGGACAGC
GAGGGCCACG GCGGACTGCG CCTGACCGAT GCCAGCCGCG ACGTGCTGAC CGGCCGCCGG
CAGATCAGCA TGCGTCGCGA CGCCGTCAGC ACCAGCACCG GCCGTGAGCG CAGCGCGCAG
CGCACCGGCC TGTCGGTGCT GCCGCAGGAT CTGGCGCTGT TCAATGCCCT GCGCGGCCTG
CGTGCCGAAC TGGCACGCGA ACAGAACGTG CCGGCGTTCG TGATCTTCCA CGACAGCACC
CTGCGCAACA TCGCCGAACA GCGCCCGACC AGCCTGGACG AACTGGCCCG GGTCGGCGGC
ATCGGCGGCA CCAAGCTGAG CCGCTACGGC CCGCGCCTGG TGGAGATCGT GCGCGAGGAA
GGTTGA
|
|---|
| Protein sequence | MASRPAHDLL QRVFGYDDFR GPQQDIVEHV AAGHDALVLM PTGGGKSLCY QVPALLRDGC
GIVISPLIAL MQDQVEALRQ LGVRAEYLNS TLDAETAGRV ERELLAGELD MLYVAPERLL
TGRFLSLLSR SRIALFAIDE AHCVSQWGHD FRPEYRQLTV LHERWPEIPR IALTATADPP
TQREIAERLD LQEARHFVSS FDRPNIRYTV VQKDNARKQL GDFLRSHRSE AGIVYCMSRR
KVEETAEFLC TQGFNALPYH AGLPSEVRAN NQRRFLREDG IVMCATIAFG MGIDKPDVRF
VAHTDLPKSM EGYYQETGRA GRDGEAAEAW LCYGLGDVVL LKQMIEQSEA GEERKQLERG
KLDHLLGYCE SMQCRRQVLL AGFGETYPKP CGNCDNCLTP PASWDATIPA QKALSCVYRS
GQRFGVGHLI DVLRGSENEK VRQQGHDKLS TYAIGRDLDA RTWRSVFRQL VAASLLEVDS
EGHGGLRLTD ASRDVLTGRR QISMRRDAVS TSTGRERSAQ RTGLSVLPQD LALFNALRGL
RAELAREQNV PAFVIFHDST LRNIAEQRPT SLDELARVGG IGGTKLSRYG PRLVEIVREE
G
|
|---|
| |