Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_3093 |
Symbol | |
ID | 6475992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3456463 |
End bp | 3458508 |
Gene Length | 2046 bp |
Protein Length | 681 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642732288 |
Product | helicase c2 |
Protein accession | YP_002029475 |
Protein GI | 194366865 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.649657 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACC TTGTCCATGC CAGCCGCGAA GCCCTCAGCG ACGGCGGCGC GCTCGCCTCG CACCTGGATG CCTTCGTCCC GCGTCCCGCA CAGCTGCGCC TGACCGAAGC GATCGCCGAC GCGTTGCAGC AGCGTGATCT GTTGCTGGCC GAAGCCGGTA CCGGCACCGG CAAGACCTTC GCCTATCTGG TGCCGGTGCT GCTGTCCGGG CTGCGTACCA TCATCTCCAC CGGCACCCGT GCGCTGCAGG ACCAGCTCTA CCACCGCGAT CTGCCGCGCG TGCGCCAGGC GCTCGGGGTC GGCCTGCGCA GTGCGCTGCT GAAGGGGCGT GCGAATTACC TGTGCCGCTA CCGCCTGCAG CAGGCGCGTG GAGAGCCGCG TTTTTCCAGC CCCGAACAGG CAGCGCAGTT CCAGCGGATC CTGGCCTGGT CCGGTCGCTC GGAGTTCGGT GACATCGCCG AGCTCGACGG GTTGGCCGAC GACTCCCCAT TGCTGCCGAT GGTCACTTCC ACTGTCGACA ACTGCCTGGG CACCGATTGC CCGTTCTGGG ATGACTGCTT CGTGGTGCGC GCGCGGCAAC GCGCGCAGGC CGCCGATGTG GTGGTGGTCA ACCATCACCT GCTGCTGGCC GATCTGGCGC TGAAGCAGGA CGGCTTCGGT GAGCTGTTGC CCGGTGCACA GGCCTTCGTC ATCGACGAGG CGCATCAGCT GCCCGAATTG GCCGCGCAGT TTTTTGGCGA AGGCTTCGGC ATGCGCCCGT GGCAGGAGCT GGGACGCGAC TGCCTGGCCG AAGCACGTGG CGTGGGTGGC GCACAGTCGG CCCTGCAGGA GCCGGTCGAT CAGCTGCAGC AGGCGCTGCT GGCGTTGCGA TCGGCGATGG AAGGGCTGCC GTCGCGTGGC ACGCAGTGGC GTGCGTTGGC GATGCCGCAG GTACGTGACG GCTTCGATAC GGTGATGGCG GGCCTGGTGA TGCTGGAGCA GGCACTGCAG CCGCTGCGCG AAGCGGCGGC CGGCCTGGAT GCCTGCCATG CGCGGGCGCG CGAGGCGGTC TCGCGGCTCA GCCGCTGGCT GGGCGATGAC GAACCCACTC TCGATTTCGA CACCGATCCG TCGGAAGCGA ACAGTGCGGC CGATGTGCTC TGGTACGAGC TTACGCCGCG TGGTTTCCGT TGCCAGCGCA CGCCGATGGA TGTGTCCGGT CCGTTGCGTG AGCATCGCGA GCGCAGCCGT GCCGCGTGGA TCTTCACTTC GGCAACGCTG ACCGTGGGCG GTGGTTTCGA TCACATCGCC ACCCGCCTGG GCCTGGACGA TCCGCACACG CTGGTGCAGC CGAGTCCGTT CAACTGGCCT GAGCAGGCGC TGTGCTACAT GCCCGAGGGC CTGCCCGATC CCGCCGCGCG CGGTTTCGGT ACCGCACTGA TCCAGAGCCT GCGGCCAGTG TTGCAGGCGT CGCAGGGCAG GGCATTCCTG CTGTTTGCTT CGCATCGCGC CCTGCGTGAG GCGGCCGAGG CATTGCGCGA CGGGCCATGG CCGTTGTTCG TGCAGGGCGA GGCGCCACGC GCGACGCTGC TGCAGCGCTT CCGCGAATCC GGCAACGGCG TGCTGCTCGG CTCGGCCAGC TTCCGCGAGG GTGTGGACGT GGTCGGCGAA GCGCTGAGCG TGGTGATGAT CGACAAGCTG CCGTTCGCGG CGCCGGATGA CCCGGTGTAC GAGGCGCGGT TGGAGGCGAT CCGCAGCCAG GGGGGCAACC CGTTCCGCGA CGAGCAGTTG CCTCAGGCCG TGATCGCGCT GAAGCAGGGC GTCGGCCGCC TGATCCGCAG TGAGAGCGAT CGTGGCGTAC TGGTGCTGTG CGACCCGCGC CTGCTCAACC GGGGCTATGG CCGGGTCTTC CTCGATTCGC TGCCGCCGTT CCGGCGTACC CGCAGCCTGG CCGATGTGCA GGCCTTCTTT ACGCCACAAT GGGCACCCGT GGCCGATGCT GCTGCTCCGT CCGCTGTTGC GGCGGGCCCG CAACCGGCAC CCGGCGCCAC GTTCCCCCTG TTCTGA
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Protein sequence | MSDLVHASRE ALSDGGALAS HLDAFVPRPA QLRLTEAIAD ALQQRDLLLA EAGTGTGKTF AYLVPVLLSG LRTIISTGTR ALQDQLYHRD LPRVRQALGV GLRSALLKGR ANYLCRYRLQ QARGEPRFSS PEQAAQFQRI LAWSGRSEFG DIAELDGLAD DSPLLPMVTS TVDNCLGTDC PFWDDCFVVR ARQRAQAADV VVVNHHLLLA DLALKQDGFG ELLPGAQAFV IDEAHQLPEL AAQFFGEGFG MRPWQELGRD CLAEARGVGG AQSALQEPVD QLQQALLALR SAMEGLPSRG TQWRALAMPQ VRDGFDTVMA GLVMLEQALQ PLREAAAGLD ACHARAREAV SRLSRWLGDD EPTLDFDTDP SEANSAADVL WYELTPRGFR CQRTPMDVSG PLREHRERSR AAWIFTSATL TVGGGFDHIA TRLGLDDPHT LVQPSPFNWP EQALCYMPEG LPDPAARGFG TALIQSLRPV LQASQGRAFL LFASHRALRE AAEALRDGPW PLFVQGEAPR ATLLQRFRES GNGVLLGSAS FREGVDVVGE ALSVVMIDKL PFAAPDDPVY EARLEAIRSQ GGNPFRDEQL PQAVIALKQG VGRLIRSESD RGVLVLCDPR LLNRGYGRVF LDSLPPFRRT RSLADVQAFF TPQWAPVADA AAPSAVAAGP QPAPGATFPL F
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