Gene Smal_3085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3085 
Symbol 
ID6475984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3443138 
End bp3449776 
Gene Length6639 bp 
Protein Length2212 aa 
Translation table11 
GC content68% 
IMG OID642732280 
ProductCheA signal transduction histidine kinase 
Protein accessionYP_002029467 
Protein GI194366857 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases
[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.284349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGTC TGCGCGATGC GATGAGCCAC GCAGCGCTGG GCTGGGTCAA GCCCGAGCTG 
GACGAGACCC TGCGCCAGGT GCGCAACGAG GTCGAGTACT ACGCGGAAGA TCCCAGCGAT
GCCAGCCGCA TGCGCATCTG CGCCGGCTAC CTGCACCAGG TGCAGGGCAC CCTGCGCATG
GTCGAGCTGT ATGCCCCGGC GATGGTGGCC GAGGAGCTGG AACAGCTGTC CAACGCCATC
GGTGCCGGCC GTGTGGCCGA TCGCGATGAG GCCTGTGCAA CCCTGATGCG CGGCAGCGTG
CTGCTGCCCG ATTACCTGGA GCGCCTGCAG AACGGTCATC GCGATATTCC GATCGTGCTG
ATGCCGCTGC TCAACGAGAT CCGTGCCGCG CGAGGCGAAG AAGGCGTGCA TGACAGCGTG
CTGCTGGCGT TCGCGCCGGA CAGCGTCAGT GCCACCGAGG CCGAGCTGGA CCATGCCCGT
GGCAGCCTGA GCGGGCGCAA CCGCGAGCTG CTGGATACCG TGGGCAGCGC GGTGAAGGAA
GAACTGCTGC GCATCAAGGA TGCGCTGGAC CTGCACCTGC GCACCGGCGG CGCACCGGAG
CAGCTGCAGA CCCAGGCCAA CGAACTTGGC GCCGTGGCAG ATACGCTGGG CATGATGGGC
CTGGGCGTGG CCCGCGGCGT GGTCGTGCAG CAGCGCGACG CGCTGCGTGG CGTGGTCGAG
GGTCGCCAGC AGATCGATGA GAACCTGCTG CTGGATATCG CCGGCGCACT GCTGTACGTG
GATGCCTCGC TGGACGACCA GGTGGCCCAT CTGGGCGCCG GTGGCAGTGG CGAGGACGAT
CCGAGCGCGG TCGAGAATCG GCGCACCGTG GAAGTGCTGG CGCATGAAGC CATCGCCAAC
TTCGCGGCGG CCCGCGAGCA TTTCGTCGCT TTCATTGAAA CCAGCTGGAA CCATGCCGAG
CTGCAGGATG TGCCGCGCCT GCTGGGCGAT GTCTCCGGCG CGCTGCGCAT GCTCGACCTG
GGCACTGCTG CCGACTATCT GCGCGGCGTG CAGCAATACA TCGAAGCCGA ACTGGTCGGC
CGCCAGCGCG TGCCCAGTGG CCGCCAGCTG GATACCCTGG CCGATGCCAT GGCCAGCCTC
GAGTATTACC TGGAGGCGCT GCGCGACCGT CGCCCCGGCC GCGAGGACAT TCTCGAGATC
ACCCGTAGCA GCCTGGAAGC GCTGCGCTAT TGGCCGCTGC CGGACCGCAA TGCAGCGACG
CCTGCCGCAG CCGAGCCGGT GGTGTTCGCA TCGCTGCTGG TCGAGCGCGA GCCGGTCGCG
GTGGAGACCG GGCCGCTGCA GCCGGAACCT GTCGAGATCG CGGTGCAGCC CGCCGCACCC
GCCGCTGGCA CCGTACCGGT GCCGCTGCCG GACTTCACCT TCGATCCACC GCCGGTGGCG
CCGCCAGAGG TTGCCGACAA CAGCCTGATG TTTGGTGCGC TGGGCTCCGC GGCAGTCACT
GCTGCGGTCA ATGCCGGCAG CGCCGGCGCG ACGCCCTTGT CGCTTCATGA CGGGGAGGAT
GCGCCGCTGG TGTTCGCGGC CTCCAGTGCA CCGGCACCCG AGGTTCCGCA GTGGGACCTG
GCGCCGTTCC ATCCGGACGC CGATCCGCTG GCGGTCGCCG ATGACGAACG CAGCCCGACC
TTCGCCAGCT TCGATCCGGT CGGCTTCGAA CAGGCCGATG CCGGGCAGTT CGCTGCGCCG
CAGTGGGCGT TGTCCGGGGC GCCGTCGCAT GACCTGGCGG ATGCCACCAC GCTGACCGCT
GATGACGCTG GCGATGTTGC GGTATCGATC GACACCGGCT TCGATGCCGC GCCGGTGTTC
GATCCGGTTG CAGCCGAGCA TGAGGCTGGC GCACTGCCGG ACGATGATGT GGTGTTCCGC
TTCGATGCCG ATGCGCTGGA CAACGCCGAC GACGTGCTGT CGCTGCACGC GATGGAGACC
TTGTCGCTGG ACGACGATGC CGGCCTGCTG CCGTCGCTGG AGATCGTCGA TACCGCCGCG
CCCGTGCTGG TGGACGAAAG CCCCGTGGTT GCCGAAGTCG ACGCCGTTCC GGCGGATGTG
CCGGAGGACG TGCCCGCGCC GATGGCCGAG GTGCTGACGC CGGCCTCCGA TGCACCGGCG
CCGGCGGTAT CGGTGATTGA TATCGACACC ATCGCGCCCA TCGATTTCAG CGAAGCCGAT
GCGCAGTTCT TCGCCGAACT GAGCGCGGCG GCCGCCGATT TCAATCCGCA GGCGGCAGCC
ACTCCCGCCG CTGCGGAAAC GCCGGTCGTG GTCGCTGCCG ACGCCGGCTT CGAGGCCGGC
TTCGATGACG ACGCGGAGAA CATCGACGAG GACATCCGCG AGGTGTTCCT GGAAGAGTTC
GACGACGAAC TGGCCAACCT CGGCACGCTG CTGCCGGCAT GGCGCATGCA GTTGGACAAC
ATGGACCGGC TGCGGCCGAT CCGGCGCATC TTCCACACCC TCAAGGGCAG TGGCCGCCTG
GTCGGTGCGC GCACCCTGGG TGAGTTCGCG TGGAAGATCG AAGGCATGCT CAACCGCGTG
CTGGATGGCA GCCGCGCGGC CTCGCCGGCG GTGCTGGCGA TGGTCGACAA CGCCCACGCC
GCGTTGCCGC AGCTGAACGC CGCGCTGCGC GATGGCCAGC GCATCAGCGT CGACCTGCAG
GCGATGCAGG CCATCGCCGA CCGCGTTGGC GCCGGCGAGG AAACGTTCTA CGTACCGTTG
CCGGTCGCTG CCGCACCGGC AGTGCCGCCG TCTGCGGCCG AAGGCGAAGA CGAGATCAGC
CGCATCCTTG AGGCCGAAGC GGTGGCATCG GTGCAGGGCA ACGCTGGTAC GGTGGTTGAA
GCAACCGGTA CGCCGGCCAA CATCGACAGC GTGCTGCGCG AGATCCTCGA GGCCGAGGTG
GAAGTCCACC AGGCGACCCT GCAGGACTGG CTGCGCTCGG CGCAGCAGGC ACCGCAGCCG
GTCAGCGACG CACTGCTGCG CGCGGTGCAC ACCATGAACG GTGCCTTCGC GATGACCGAA
GTGCCGGAGA TCACCGCCGT CACCGGGGGC GCCGAGTCCT ACATCAAGCG TGCACTGGCC
GCTGACGTGG TGCCGGGTGA AGAAGGCCTG GCCGCACTGG ATGCGACCGC GCAGGCGATC
ACTGCGACCA TGGACGCGCT GCAGGCCGAA CAGCCACGCA TCGCACCGCA GGACGCGCTG
GTGCAGCGTT TGCAGGCGCT CGCCGGCGAA CTGCCGGAAG CGCGCTGGCC GATGGTCGGG
CTGGAAGATG AAGACGAAGA CCTGGCGCTG GACGCAGAGG ACGATGCCGA AGTGCCGGCA
GCTCTCGAAG CCCCGTCCGA GCAGGTGCTG GAACCGATTC CGGCCGAGGT GGACGTGGCA
GCGGCCCTCG CCACCGCCGA CAGTGGGCTG GACGTTGCCG AGCTGACCGC CAGCGATGAT
CTTTCGCGCT ACTTCGATGC GGGATGGCCG TCGGTGCCGG GCGAAGGCGA GCCCGCCGTG
ATCGCCCCGG ACGCACTTGA ATCGGTCCAG GTGGACGCGA TCGCGGCAAT CCCTGCCACG
GAGGACGCGG ACGCGGAGCC CGCATCGTCG CTGGCCGACG CCGCCGATCT CACCGTGGCC
GATGATCTGT CGCCGTACCT GGATGCCAGC GCATTGCCGG TGGATGACCG TGATGCTGAT
GAGGCAGCGA CGTTCGGCGA AGCTGACGCA ATCAACCTGA ATGCGACGTT GTCCGATGAC
GCCGATGTCG TTGAAGACAG CTTCCTCGAC ACACCTGCTG CACTGCCACT CGACAGCGAG
CTGTCGAGCC TGCAGGATGA AATGGCTGCG CCGGGTTTTG CAGAACCGGT CACGCTGGCA
GCCGCGCTCG AGGCCGGCCT GCACGTGATC GACGAAGAGC AGACCCTGGC CGACGACGGG
CATTGGCCCG TACTCGGCCT GCAGGCCAGC GAACTCGCGC CGGGCGAGGC GGAAGCCTTT
GCCGAGGATG CGGACGTCGG CGGGGAGGCG GCGGTCGGTG AAGGAGAGAG CGCCGATCAG
CCGTCCCCGG CGACGGTGAA TGAGGAGATC GCTGCGGAAG CACCGCAGGC CACTGATGAG
CCGGTGCGCT TCTTCGAACT CGAAGACGCA CCAGGTCAAG GGACGGTGCA TGCCGAAGTC
GCCGAAGCCG AAGCCAGCTC CCTGGTCATC GACGCGATGC CGGCCGCAGC AGCCGAAGAA
GAAACCGAAG ACAGTGCAGA CACACTCGAC TTCAGCGTGT ACGACCGCGA GCTGGTCGAC
ATCTTCGTCG AGGAAGGCAA GGACCTGCTC GACCACTGCG ATGGCCTGAT CAGCGAACTG
CGCGATGCGC CACAGGATCG CGAGGCGCTG TCCGGCCTGC AGCGCGACCT GCATACCCTC
AAGGGTGGTG CACGCATGGC CGGCATCAAT GCCATCGGCG ATCTTGGCCA CAGCATCGAA
TCGCTGCTGG AAGCTGTCGC CGCCGGCCGC ACCGAGATCG AACGCCGCGA CGTGCAGCTG
CTGGAGCGTG GTTTCGACCG CCTGCACCAG CTGCTGACCC GCACCGGTGC CCACCGTGTG
GTGGAACCTG CACAGGATCT GGTCGAGGCC TTCGAGGTCC GCACCACCAC CGATATCGCC
GCGGCTGCCG CTGCGGCCAA TGCCGCCAGC ATGGTCGAAG CCGCATCGGC AACGATCGCA
GCTCCGGTCA CCGCACTGGC TGATGCGCCG CTGTCGGCGC CGTTGCCGGC CGAAGGCGTG
GTCGATGAAG ACGCGCTGGC GCGCCCGCAA CAGGAACAGG TACGCGTGCG CGCGGATCTG
CTCGACCGCC TGGTCAACCA TGCCGGTGAA GTGGCGATCT ACCGCTCGCG GCTGGAGCAG
CAGCTGGGTG CCTTCCGTGG CGCCATGGGT GAGCTGGAAC GTACCAACGC GCGACTGCGC
GATCAGCTGC GCCGCCTCGA TCTGGAAACC GAGGCGCAGA TCGTCGCCCG CTACCAGCGT
GAGCAGGACC AGGCCGATCA GAAGTTCGAC CCGCTGGAGC TGGATCGCTT CTCCACCCTG
CAGCAGCTCA GCCGTGCGCT GAACGAATCG GCGGCTGACC TTGGCGGCCT GCAGGGCGTG
CTCGATGATC TGTCACGCCA GTACGATTCG CTGCTGCAGC AGCAGTCGCG CGTCAGCTCG
GAACTGCAGG ATGGCCTGAT GCGCGCGCGC ATGGTGCCGT TCGATGGTCT GGTGCCGCGC
CTGCGCCGCG TGGTCCGCCA GGCCGGCATG GACACCGGCA AGCAGGTCCA CCTGACCCTG
GAAGGTACCC ACGGCGAACT CGACCGCAAC GTGCTCGACC GCATGGTCGC GCCGCTGGAA
CACATGCTAC GCAATTCCGT GGCCCATGGC CTGGAAGCGC CGGAGCAGCG CCGTGCCGCC
GGCAAGCCGG AGGAGGGCGA GATTGCCATC CGCCTGCACC GCGAAGGCTC GGAAATCGTG
CTGGACGTGG CCGACGACGG CGCTGGCCTG GATCGCGAAG CGATCCGCCG CCGCGCTCTC
GACCGTGGCC TGCTGGTTGC CGATGCGCAG CCGAGCGAGC AGGAGCTGGA CAACCTGATC
TTCGCCTCCG GTTTCACCAC TGCCGATCAG GTCAGCCAGT TGGCCGGCCG CGGCGTGGGC
ATGGACGTGG TGCGCAACGA AGTGCGCCAG CTGGGCGGCT CGGTCGACAT CCAGTCGGTG
CGTGGCCAGG GCGTGCGCTT CACGCTGCGC CTGCCGCAGA CACTGGCGGT CACCCAGGCG
GTGTTCGTGC AGATCGGCGA AACCACCTTC GCGGTGCCGG TCGCCTCGGT CAGTGGTATC
GGCCGCCTGT CGCGCGAGCG TTTTGAAGCC GCCGACAGCA GCTACCGCTA CAGCGGCGAA
GACTACCCGC TGTACGACCT CGGCAGCCTG GTCGGACAGG CCCCGGCGCG TGCCGATGGC
CAGGACCAGG TGCCGCTGCT GCTGGTCCGC GCCGGCGACC TGCGCGCCGC CGTGGCGATC
GACCAGGTAC TGGGCAACCG CGAAATCGTG GTCAAGCCGG TCGGCCTGCA GATCGCCTCG
GTGCCGGGTA TCTACGGTGC CACCATCACC GGCGATGGCC GCGTGGTGGT GATCCTGGAC
GTGGCGCCGC TGGTGCGCCG CTTCCTCGCC AATCCGACGC TGCCGGTACT GGCCAATGCA
CCACGGCAGG AGCGCCAGGT GCCGCTGGTG ATGGTGGTCG ACGACTCGCT GACCATGCGC
AAGGTCACCG GCCGCATCCT CGAGCGCCAC AACTTCGAGG TCAGCGTCGC CCGCGATGGC
GTGGAAGCGC TGGAGCGGCT GGAAGAGCGC GTACCCGACC TGATACTGCT GGATATCGAG
ATGCCGCGCA TGGATGGCTA CGAGCTGGCC ACCGCGATGC GTGCCGACCC GCGCTACAGG
GACGTGCCGA TCGTGATGAT CACCTCGCGC AGCGGCGACA AGCACCGCCA GCGCGCCTTC
GAGATCGGTG TCCAGCGTTA CCTGGGCAAG CCGTACCAGG AACTGGACCT GATGCGTAAC
GTGTACGACC TGCTGGGGAT CGCCCGTGTC CGTGAGTGA
 
Protein sequence
MSSLRDAMSH AALGWVKPEL DETLRQVRNE VEYYAEDPSD ASRMRICAGY LHQVQGTLRM 
VELYAPAMVA EELEQLSNAI GAGRVADRDE ACATLMRGSV LLPDYLERLQ NGHRDIPIVL
MPLLNEIRAA RGEEGVHDSV LLAFAPDSVS ATEAELDHAR GSLSGRNREL LDTVGSAVKE
ELLRIKDALD LHLRTGGAPE QLQTQANELG AVADTLGMMG LGVARGVVVQ QRDALRGVVE
GRQQIDENLL LDIAGALLYV DASLDDQVAH LGAGGSGEDD PSAVENRRTV EVLAHEAIAN
FAAAREHFVA FIETSWNHAE LQDVPRLLGD VSGALRMLDL GTAADYLRGV QQYIEAELVG
RQRVPSGRQL DTLADAMASL EYYLEALRDR RPGREDILEI TRSSLEALRY WPLPDRNAAT
PAAAEPVVFA SLLVEREPVA VETGPLQPEP VEIAVQPAAP AAGTVPVPLP DFTFDPPPVA
PPEVADNSLM FGALGSAAVT AAVNAGSAGA TPLSLHDGED APLVFAASSA PAPEVPQWDL
APFHPDADPL AVADDERSPT FASFDPVGFE QADAGQFAAP QWALSGAPSH DLADATTLTA
DDAGDVAVSI DTGFDAAPVF DPVAAEHEAG ALPDDDVVFR FDADALDNAD DVLSLHAMET
LSLDDDAGLL PSLEIVDTAA PVLVDESPVV AEVDAVPADV PEDVPAPMAE VLTPASDAPA
PAVSVIDIDT IAPIDFSEAD AQFFAELSAA AADFNPQAAA TPAAAETPVV VAADAGFEAG
FDDDAENIDE DIREVFLEEF DDELANLGTL LPAWRMQLDN MDRLRPIRRI FHTLKGSGRL
VGARTLGEFA WKIEGMLNRV LDGSRAASPA VLAMVDNAHA ALPQLNAALR DGQRISVDLQ
AMQAIADRVG AGEETFYVPL PVAAAPAVPP SAAEGEDEIS RILEAEAVAS VQGNAGTVVE
ATGTPANIDS VLREILEAEV EVHQATLQDW LRSAQQAPQP VSDALLRAVH TMNGAFAMTE
VPEITAVTGG AESYIKRALA ADVVPGEEGL AALDATAQAI TATMDALQAE QPRIAPQDAL
VQRLQALAGE LPEARWPMVG LEDEDEDLAL DAEDDAEVPA ALEAPSEQVL EPIPAEVDVA
AALATADSGL DVAELTASDD LSRYFDAGWP SVPGEGEPAV IAPDALESVQ VDAIAAIPAT
EDADAEPASS LADAADLTVA DDLSPYLDAS ALPVDDRDAD EAATFGEADA INLNATLSDD
ADVVEDSFLD TPAALPLDSE LSSLQDEMAA PGFAEPVTLA AALEAGLHVI DEEQTLADDG
HWPVLGLQAS ELAPGEAEAF AEDADVGGEA AVGEGESADQ PSPATVNEEI AAEAPQATDE
PVRFFELEDA PGQGTVHAEV AEAEASSLVI DAMPAAAAEE ETEDSADTLD FSVYDRELVD
IFVEEGKDLL DHCDGLISEL RDAPQDREAL SGLQRDLHTL KGGARMAGIN AIGDLGHSIE
SLLEAVAAGR TEIERRDVQL LERGFDRLHQ LLTRTGAHRV VEPAQDLVEA FEVRTTTDIA
AAAAAANAAS MVEAASATIA APVTALADAP LSAPLPAEGV VDEDALARPQ QEQVRVRADL
LDRLVNHAGE VAIYRSRLEQ QLGAFRGAMG ELERTNARLR DQLRRLDLET EAQIVARYQR
EQDQADQKFD PLELDRFSTL QQLSRALNES AADLGGLQGV LDDLSRQYDS LLQQQSRVSS
ELQDGLMRAR MVPFDGLVPR LRRVVRQAGM DTGKQVHLTL EGTHGELDRN VLDRMVAPLE
HMLRNSVAHG LEAPEQRRAA GKPEEGEIAI RLHREGSEIV LDVADDGAGL DREAIRRRAL
DRGLLVADAQ PSEQELDNLI FASGFTTADQ VSQLAGRGVG MDVVRNEVRQ LGGSVDIQSV
RGQGVRFTLR LPQTLAVTQA VFVQIGETTF AVPVASVSGI GRLSRERFEA ADSSYRYSGE
DYPLYDLGSL VGQAPARADG QDQVPLLLVR AGDLRAAVAI DQVLGNREIV VKPVGLQIAS
VPGIYGATIT GDGRVVVILD VAPLVRRFLA NPTLPVLANA PRQERQVPLV MVVDDSLTMR
KVTGRILERH NFEVSVARDG VEALERLEER VPDLILLDIE MPRMDGYELA TAMRADPRYR
DVPIVMITSR SGDKHRQRAF EIGVQRYLGK PYQELDLMRN VYDLLGIARV RE