Gene Smal_3082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3082 
Symbol 
ID6475981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3440519 
End bp3441256 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content71% 
IMG OID642732277 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_002029464 
Protein GI194366854 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.584805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.179452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTGA CCCGCTGCCC CATCGACCTG GCGCTGCACA GCGGCCAGAC CGTGACCCTG 
CCGGAAGAGA CCGCCAACCA CCTGGTACGG GTGATGCGCC TGCGCGAGGG CGATACCTGT
GTGCTGTTCA ATGGCGATGG CCACGACTAC AGCGCGACGC TGACCGTGGC CGGCAAGCGC
GAAGTGCAGG TGCGCATCGA CGCCGTGCAG GCCATCGACA CCGAATCGCC GCTGGCGATC
ACCCTGCTGC AGGGCATCGC CCGCGGCGAG AAGATGGACC TGATCCTGCA GAAGGCCACC
GAGCTGGGCG TGGCGGCGAT CGTTCCGGTC AACGCCGAGC GCACCGAGGT GAAGCTCGAT
GCAGCACGCG CGGAGAAGCG CGTGGCGCAC TGGAACAACG TGGTGACCTC AGCCTGTGGC
CAGTCCGGGC GCGCGCGCAT TCCGCAGGTG GGCCCGCCGC TGTCGCTTGC GCAGGCGGCA
GCGGCGCTGC CGGTGGATAC GCTGCGGTTG ACCCTGGATC CGCAGGGTGC GCACCGGCTG
TCGACGCTGG ACGCCGCGCC TGGCGGGGGC ATCGTGATTG CAATCGGTCC GGAAGGGGGG
TGGTCGCCAC GCGACCGTGA TCAACTGGCG GCCGCGGGCT TCCAGGGCCT GCAGCTGGGG
CCGCGCATCC TGCGTACCGA GACCGCCGGG CTGGCCGCGA TCGCGGCGCT GCAGGCGCGG
TTGGGCGATC TGGGGTAA
 
Protein sequence
MRVTRCPIDL ALHSGQTVTL PEETANHLVR VMRLREGDTC VLFNGDGHDY SATLTVAGKR 
EVQVRIDAVQ AIDTESPLAI TLLQGIARGE KMDLILQKAT ELGVAAIVPV NAERTEVKLD
AARAEKRVAH WNNVVTSACG QSGRARIPQV GPPLSLAQAA AALPVDTLRL TLDPQGAHRL
STLDAAPGGG IVIAIGPEGG WSPRDRDQLA AAGFQGLQLG PRILRTETAG LAAIAALQAR
LGDLG