Gene Smal_3079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3079 
Symbol 
ID6475978 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3437696 
End bp3438499 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content68% 
IMG OID642732274 
Product3'(2'),5'-bisphosphate nucleotidase 
Protein accessionYP_002029461 
Protein GI194366851 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase 
TIGRFAM ID[TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.955512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.146512 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAT TGACCACGGA CCTGCGCGAG ACCGCCATCG CCATCGCCCA GGAAGCCGGA 
CAGGCCATCA TGCAGGTATA TGCCGATGGC TTCGACGTGC AGCTCAAGGA CGACAACAGC
CCGGTCACCG CCGCCGACCT GGCCGCCAAC CAGGTCATCG AGCAGGGCCT GCAGCAGCTG
ACCCCGGATC TGCCGATCCT GTCCGAGGAG TCGGCCCAGG TCACGTGGGA GCAACGCCGT
CATTGGGGCG CCTACTGGCT GGTCGACCCG CTGGACGGCA CCCGCGAGTT CATCAAGCGC
AACGGCGAGT TCAGCGTCAA CATCGCATTG ATCTACCAGG GTGCGCCGGC CTTCGGCGTG
GTGCTGGCGC CGGTCACCGG CATCGTCTGG CATGCCATGC GCGGTGAGCT GGCATACCGT
CGCCAGGGCC TGCACGACAC CGTGCTGCGT ACCCGTACGC CGGCCACCGC ACCACTGCGG
GTCGCCGCCA GCCGCTCGCA CCGCTCGCCG GAAACCGAAG CGCTGCTGGC GCGGATGGGC
CGCATCGAAA CCATCGCGCA GGGCTCATCG CTGAAGTTCT GCCGGATCGC CGAAGGCGGG
CTGGATGTCT ATCCCCGGCT GGGCCCGACC TCCGAATGGG ACACCGCCGC CGGCCAGTGC
GTGCTGCACG CCGCCGGTGG CGCGGTGCTG TCGGCGGCGA CCGGCAAGCC GTTCCGCTAC
AACCGCCGCG AGACCCTGTT GAACGGTGAT TTCATTGCCC TTGGTGACAC CAGCCTGCCC
TGGCGCGACT GGTTGTCCGA TTGA
 
Protein sequence
MIKLTTDLRE TAIAIAQEAG QAIMQVYADG FDVQLKDDNS PVTAADLAAN QVIEQGLQQL 
TPDLPILSEE SAQVTWEQRR HWGAYWLVDP LDGTREFIKR NGEFSVNIAL IYQGAPAFGV
VLAPVTGIVW HAMRGELAYR RQGLHDTVLR TRTPATAPLR VAASRSHRSP ETEALLARMG
RIETIAQGSS LKFCRIAEGG LDVYPRLGPT SEWDTAAGQC VLHAAGGAVL SAATGKPFRY
NRRETLLNGD FIALGDTSLP WRDWLSD