Gene Smal_3068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3068 
Symbol 
ID6475967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3428166 
End bp3429566 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content69% 
IMG OID642732263 
Productbeta-lactamase 
Protein accessionYP_002029450 
Protein GI194366840 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.129348 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA ACAGCCTGCG TCGTCCGATC CGTTCGGCGG CCACCGGTTT GCTGGGCATG 
TTGATGCCCG TTGCCTTGTC CACCACCGCG CAGACCCCGC CGCCATTGCC GCCGATGCCG
ACCAACATCG AGTCCGCTGC CGGCGCTGCT GTCGCCCACA CCCAGCCGGC GGCCTACCGT
ACCGGCCTGG TGCCGCAGGT GCAGCTGCCA GCGGCCGGCT TCAACGTCGC CAACATCGAA
TCGATGGCGC AGCAGCTGAC CTATGGCGAG CGCGTGCCGG GCATGGCCGT GGCGATCGTG
CAGGGTGGCC GTGTGCTCAG CGCACGCGGC TATGGCGTCA CCGACGTCAA CAACCCGCTG
CCGGTTGATG CCCACACCGT GTTCCGCCTG GCGTCGCTGT CCAAGGCCTT CGCCGGCACC
ATGGCCGGCC TGCTGGTCAA CGACGGCACC CTGCGCTGGG ACAGCAAGGT CACCGACTAT
GTGCCGGGCT TCCGCCTCAA CTCGCCGGAA GCGACCGACC GCCTGACCGT GGCCGACGTG
CTCAGCCACC GCGTCGGCCT GCCGTACAAC GCCTACGACC GCGACATCGA AGGCAACGCC
GAGTACTACT CGCTGACCCA GAAGCTGGCC AACACCGGCC TGAAGTGCCT GCCGGGCGAC
TGCTACGCCT ACCAGAACGT GGCCTTCAGC CTGATCGGCG ACGTGGTCTA TGCCGCCTCG
GGCAGCTTCT ACGAGCAGTC GGTCGAGCGC CGCATCTTCA AGCCGCTGGG CATGAACGAT
GCCAGCCTCG GCCTGGCCGG CATCCAGGCC AGCTCGCGCT GGGCGCGCCC GCACGTGCGC
AGCCGCAACG GCTGGGTGTC ACTGACACCG AAGCCGACCT ATTACCGCGT CGCCCCGGCT
GCCGGCGTCA ACGCCAGCGC CAGCGACATG GCGCAGTGGC TGCTGGCCCA CACCGGCCAC
CGTCCGGACG TGCTACCGGC GCCGCTGCTG GCGACCCTGC ATTCCAGCCT GATCAACACC
CCGGGCGAGA TGCGTTCGGG CTGGCGCCGC GAGCGGCTGC ACTCGGCCGG TTACGCGCTG
GGCTGGCGCA CCTTCGACTA CGCCGGCCAC GACGTGGTGT TCCATGCCGG TGCCGTGCAG
GGCTATCGCG GCCTGGTCGC GCTGGTGCCG GAACGCGATC TCGGCATCGC CATCATGTGG
AACGGCGAAA GCGGCCTGCC CAGCGGCCTG TTGCCGACCG TGCTCGATTC CGCGCTCGGC
CTGCCGACGC AGCGCTGGCT GGACGTGGAC ACCGACTTCG GCAGCGACAA CCTGATGGCC
GAAGGCGCGA GCCCTGCGCA GCAGGACAAG CGCAAGGGCA AGGGCGCTTC CAGCAACCGT
GCCGTGGCCT CGCCGCGCTG A
 
Protein sequence
MKKNSLRRPI RSAATGLLGM LMPVALSTTA QTPPPLPPMP TNIESAAGAA VAHTQPAAYR 
TGLVPQVQLP AAGFNVANIE SMAQQLTYGE RVPGMAVAIV QGGRVLSARG YGVTDVNNPL
PVDAHTVFRL ASLSKAFAGT MAGLLVNDGT LRWDSKVTDY VPGFRLNSPE ATDRLTVADV
LSHRVGLPYN AYDRDIEGNA EYYSLTQKLA NTGLKCLPGD CYAYQNVAFS LIGDVVYAAS
GSFYEQSVER RIFKPLGMND ASLGLAGIQA SSRWARPHVR SRNGWVSLTP KPTYYRVAPA
AGVNASASDM AQWLLAHTGH RPDVLPAPLL ATLHSSLINT PGEMRSGWRR ERLHSAGYAL
GWRTFDYAGH DVVFHAGAVQ GYRGLVALVP ERDLGIAIMW NGESGLPSGL LPTVLDSALG
LPTQRWLDVD TDFGSDNLMA EGASPAQQDK RKGKGASSNR AVASPR