| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3054 |
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| Symbol | |
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| ID | 6475953 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 3410149 |
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| End bp | 3410793 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642732249 |
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| Product | channel protein, hemolysin III family |
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| Protein accession | YP_002029436 |
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| Protein GI | 194366826 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1272] Predicted membrane protein, hemolysin III homolog |
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| TIGRFAM ID | [TIGR01065] channel protein, hemolysin III family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.126772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCCATGT CCACGACGTC CATTGCTTCG ATCCGTGAAG AAATCGCCAG CGCCTTGACC
CACGGGTTGG GCGCGGTATT CGCCCTGGCC GCCAGTGCGG TGTTGATCAC CCTGGCCGCG
ATCTACGGTG ACGGCTGGCA GCTGGCCAGT GCGATCGTGT TCGGTATCGC CCTGTTGCTG
CTGTATACCG CCTCCACGCT GTACCACGCC ATCCAGCATC CGGTCGCCAA GGGCCGCCTG
AAGGTCTTCG ACCATTGCGC GATCTACGTG TTGATCGCCG GCACCTATAC GCCATTCACC
CTGATCGGCC TGCGCGGCCC CTGGGGCTGG GGCCTGTTCA CCGCGATCTG GGCGCTGGCG
CTGGGCGGCG TGGTGTTCAA GCTGTTCTAC ACCGGCCGCT TCAAGGTGCT CTCAACCGTG
ATCTACATCG CCATGGGCTG GTTGGTAGTG GTGGCGATCA AGCCGATGTG GGCTTCGATC
GACGGCGGCA CCCTGGCCTG GCTGTTCGGC GGCGGCCTGT CGTACACGCT GGGCACGTAT
TTCTATCACC GTGAATCGAT CCCCTATTCG CATGCGATCT GGCACCTGTT CGTGATCGGC
GGCAGCGTCT GCCACTTCGT CGCAGTCACC ATGCAGGTGC TGTAA
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| Protein sequence | MPMSTTSIAS IREEIASALT HGLGAVFALA ASAVLITLAA IYGDGWQLAS AIVFGIALLL
LYTASTLYHA IQHPVAKGRL KVFDHCAIYV LIAGTYTPFT LIGLRGPWGW GLFTAIWALA
LGGVVFKLFY TGRFKVLSTV IYIAMGWLVV VAIKPMWASI DGGTLAWLFG GGLSYTLGTY
FYHRESIPYS HAIWHLFVIG GSVCHFVAVT MQVL
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