Gene Smal_3052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3052 
Symbol 
ID6475951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3407412 
End bp3408305 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content72% 
IMG OID642732247 
ProductPeptidase M23 
Protein accessionYP_002029434 
Protein GI194366824 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.346381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCC TGCCCCTGAC CTGCCTGTTG TTGTCCCTGC TGGCAAGCGC GACGGCAAGC 
GCCGGCGACT GGCGCCAGGG GTGGGGACTG GTGCCCAAGT CCGCCCCGGC CGCTCCGCCC
CCCCGTGGCG AGACCGCCCA GAGCGCCGCG CCGATGGCCC AGCTGCGCCT GCAGCCGATC
GGCCAGCAGT GGCAGGCCCG GATCGACAAT GCCCTGGCCG GGCCACTGCA GGTCGAGCTG
CGCGCCGCGC CCGGACACCC TGTCGAGGGC CTGCCGGTAC AGTCGCTTAT CCAGGGCGAC
AGCAGCCTGG TCGTCGGCCA CCTGCCCGCG CCGGTCAACG GCCGCACCTT GGACCTGCGC
CTGCGGTCGG TTCCGGGCAA CCCGGCCGCG CAGGCCGAGG ATGTGGCCTA CCGCCTGCCG
TTCGATGACG CCCGTCCGCG CGTGGACCAG GCACCACAGG GCCGTTTCAG CCATGATGAC
GAGGAGAACC GCGACGCGGT CGACTTCGCA CTGCCGGAGG GCACGCTGGT GCTGGCCGCG
CGCGAGGGCA CGGTGATGCA GATCCAGGAC GGCTTCCATG GCAACGGCCT GGATCGTGAA
CGCGATGGTG CCCGCGCAAA CTTCATCCGC GTGCTGCACA GCGACGGCAG CATGGCCCTG
TACGGCCATC TGCAGGCCGG TGGTATGCGT GTGCGCCGTG GCCAGGCAGT GGGCATCGGA
CAGCCGATCG GCCTGTCCGG CAACAGTGGC TTCAGCAGCG CGCCGCACCT GCACTTCGTG
GTGCAGGTCA ACCGCGGCAT GGGCCTGCGC TCGTTGCCGG CACGCATCTT CGCCGAGCAG
GGCCAGCTGC AGTTCGCCCG CCAGGGCGAG GCCGGCGGCG GCACCGGGCG CTGA
 
Protein sequence
MPRLPLTCLL LSLLASATAS AGDWRQGWGL VPKSAPAAPP PRGETAQSAA PMAQLRLQPI 
GQQWQARIDN ALAGPLQVEL RAAPGHPVEG LPVQSLIQGD SSLVVGHLPA PVNGRTLDLR
LRSVPGNPAA QAEDVAYRLP FDDARPRVDQ APQGRFSHDD EENRDAVDFA LPEGTLVLAA
REGTVMQIQD GFHGNGLDRE RDGARANFIR VLHSDGSMAL YGHLQAGGMR VRRGQAVGIG
QPIGLSGNSG FSSAPHLHFV VQVNRGMGLR SLPARIFAEQ GQLQFARQGE AGGGTGR