Gene Smal_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_3028 
Symbol 
ID6475845 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3377298 
End bp3379916 
Gene Length2619 bp 
Protein Length872 aa 
Translation table11 
GC content66% 
IMG OID642732223 
Productaconitate hydratase 
Protein accessionYP_002029410 
Protein GI194366800 
COG category[C] Energy production and conversion 
COG ID[COG1048] Aconitase A 
TIGRFAM ID[TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCG ATTACCGCAA GAACCTCCCC GGCAGCTCGC TGGATTATTT CGACGCGCGT 
GCCGCTGTCG ATGCGATCCA GCCGGGCGCC TATGCCACGC TGCCGTACGT GTCGCGCGTG
CTGGCCGAAA ACCTGGTGCG TCGTTGTGAT CCGGCCACGC TGACCGATTC GCTGAAGCAG
CTGATCGAGC GCCGTCGCGA CCTGGATTTC CCCTGGTTCC CCGCGCGCGT GGTGTGCCAT
GACATCCTCG GCCAAACCGC GTTGGTCGAC CTGGCTGGCC TGCGTGATGC GATCGCCGAC
AAGGGTGGTG ATCCGGCTAA GGTCAATCCG GTGGTGCCGG TGCAGCTGAT CGTCGATCAC
TCGCTGGCGG TGGAATGCGG TGGTTACGAT CCGCAGGCGT TCGAGAAGAA CCGCGCCATC
GAGGATCGCC GCAACGAAGA CCGTTTCCAC TTCATCGACT GGACCAAGCT GGCCTTCGAG
AACGTGGACG TGATTCCGCC GGGCAACGGC ATCATGCACC AGATCAACCT GGAGAAGATG
TCGCCGGTGA TCTACGTGCA GAACGGGGTG GCCTTCCCGG ATACCTGCGT GGGCACCGAC
AGCCACACCC CGCACGTGGA TGCGCTGGGC GTGATCGCGA TTGGTGTGGG CGGCCTGGAA
GCGGAGAACG TGATGCTGGG CCGCGCGTCC TGGATGCGCC TGCCCGACAC CGTCGGTGTC
GAACTGAGTG GCCGCCCTCA GCCGGGCATC ACCGCCACCG ATGTGGTGCT GGCCCTGACC
GAATTCCTGC GCAAGGAACG CGTGGTCGGT GCGTGGCTTG AATTCTTCGG CGAGGGTGCC
GCGGCACTGA CCATCGGTGA CCGCGCCACC ATTTCCAACA TGTGCCCGGA GTACGGCGCG
ACCGCCGCGA TGTTCTACAT CGACGGGCAG ACCATCGATT ACCTTCGCCT GACCGGCCGC
GAGGAATCGC AGGTGGCGCT GGTGGAGAAC TACGCTCGTA CCACCGGCCT GTGGGCCGAT
GACCTGGCCA CCGCACAGTA CGAGCGCGTG CTGCGCTTCG ATCTGTCCAG CGTGGTGCGC
AACATGGCCG GCCCGTCCAA CCCGCACAAG CGCGTGGCCA CCGCCGAGCT GGCCGAGCGC
GGCATCGCCG ACGAAGCCAA GCTGGAAGCG GGCAAGGCCG AGCAGGCGCA GGGGCTGATG
CCCGATGGCG CGGTGATCAT CGCCGCCATC ACCAGCTGCA CCAATACGTC CAACCCGCGC
AACGTGATCG CCGCCGCACT GCTGGCGCGC AAGGCCAACG AACGTGGCCT GCTGCGCAAG
CCGTGGGTGA AGTCGTCGCT GGCGCCGGGC TCGAAGGCGG TGCAGCTGTA CCTGGAAGAG
GCCGGCCTGC TGCCGGACCT GGAAAAGCTC GGCTTCGGCA TCGTCGCCTT CGCCTGCACC
ACCTGCAACG GCATGAGTGG CGCGCTGGAT CCGGCGATCC AGCAGGAGAT CATCGACCGT
GACCTGTATT CCACCGCCGT GTTGTCGGGC AACCGCAACT TCGATGGCCG CATCCACCCG
TATGCGAAGC AGGCCTTCCT GGCTTCGCCG CCGCTGGTGA TCGCCTATGC CATCGCCGGC
ACCGTGCGCT TCGACATCGA GAAGGACGTG CTGGGTGTGG ATGCCGATGG CAACGAGGTG
CGCCTGAAGG ACATCTGGCC GACCGATGCC GAGATTGATG CTGTGGTGAA GGCTTCGGTG
AAGCCCGAGC AGTTCCGCAA GGTCTACAAC CCGATGTTCA ACGTGCGTGT GGAGCACGGT
GCGGCGGTCA GCCCGCTGTA CGACTGGCGC CCGCATAGCA CCTACATCCG TCGCCCGCCG
TACTGGGAGG GCGCGCTGGC CGGTGAGCGT ACGCTGTCTG GCATGCGCGC ATTGGCGGTG
CTGCCGGACA ACATCACCAC CGACCACCTG TCGCCGTCCA ACGCGATCCT GGCGTCCAGT
GCCGCCGGTG AGTACCTGGC GAAGATGGGC CTGCCGGAAG AGGACTTCAA TTCCTACGCC
ACCCACCGCG GTGACCACCT GACCGCGCAG CGCGCCACCT TCGCCAACCC GAAGCTGTTC
AACGAGATGG TGCGCAACGA CGACGGCAGC GTGAAGCAGG GTTCGCTGGC GCGCGTGGAG
CCGGAAGGCA AGGTCATGCG CATGTGGGAA GCGATCGAAA CCTACATGGA CCGCAAGCAG
CCGCTGATCA TCATCGCCGG TGCCGACTAC GGCCAGGGCA GCTCGCGTGA CTGGGCCGCC
AAGGGCGTGC GCCTGGCCGG CGTGGAGGCG ATCGCGGCCG AAGGCTTCGA ACGGATTCAC
CGTACCAACC TGATCGGCAT GGGCGTGCTG CCGCTGGAGT TCAAGCCGGG CACCACCCGC
CTGACCCTGG GCATCGATGG CACCGAGACC TTCGACGTGA TCGGCGAGCG CACCCCGTGC
GCCGACCTGA CCCTGGTCAT CCACCGCCGC GACGGCCAGG ACGTGATCGT GCCGGTCACC
TGCCGCCTGG ACAGCGACGA GGAAGTGGCG ATCTACGAAG CCGGCGGTGT GCTGCAGCGC
TTCGCCCAGG ACTTCCTGGA AGGCGCCAAG GTGGCGTGA
 
Protein sequence
MNTDYRKNLP GSSLDYFDAR AAVDAIQPGA YATLPYVSRV LAENLVRRCD PATLTDSLKQ 
LIERRRDLDF PWFPARVVCH DILGQTALVD LAGLRDAIAD KGGDPAKVNP VVPVQLIVDH
SLAVECGGYD PQAFEKNRAI EDRRNEDRFH FIDWTKLAFE NVDVIPPGNG IMHQINLEKM
SPVIYVQNGV AFPDTCVGTD SHTPHVDALG VIAIGVGGLE AENVMLGRAS WMRLPDTVGV
ELSGRPQPGI TATDVVLALT EFLRKERVVG AWLEFFGEGA AALTIGDRAT ISNMCPEYGA
TAAMFYIDGQ TIDYLRLTGR EESQVALVEN YARTTGLWAD DLATAQYERV LRFDLSSVVR
NMAGPSNPHK RVATAELAER GIADEAKLEA GKAEQAQGLM PDGAVIIAAI TSCTNTSNPR
NVIAAALLAR KANERGLLRK PWVKSSLAPG SKAVQLYLEE AGLLPDLEKL GFGIVAFACT
TCNGMSGALD PAIQQEIIDR DLYSTAVLSG NRNFDGRIHP YAKQAFLASP PLVIAYAIAG
TVRFDIEKDV LGVDADGNEV RLKDIWPTDA EIDAVVKASV KPEQFRKVYN PMFNVRVEHG
AAVSPLYDWR PHSTYIRRPP YWEGALAGER TLSGMRALAV LPDNITTDHL SPSNAILASS
AAGEYLAKMG LPEEDFNSYA THRGDHLTAQ RATFANPKLF NEMVRNDDGS VKQGSLARVE
PEGKVMRMWE AIETYMDRKQ PLIIIAGADY GQGSSRDWAA KGVRLAGVEA IAAEGFERIH
RTNLIGMGVL PLEFKPGTTR LTLGIDGTET FDVIGERTPC ADLTLVIHRR DGQDVIVPVT
CRLDSDEEVA IYEAGGVLQR FAQDFLEGAK VA