| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_3016 |
|---|
| Symbol | |
|---|
| ID | 6475833 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3361063 |
|---|
| End bp | 3362196 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642732211 |
|---|
| Product | HflK protein |
|---|
| Protein accession | YP_002029398 |
|---|
| Protein GI | 194366788 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | [TIGR01933] HflK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.579125 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.214835 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCTGGA ATACACCCGG CGGCAACAAG GGCGGACAAG GCCCCGAGGA CAAGCGACGT
GGGCCTTTCG GCACGCGCGG CGGTGGCAAT GGCGGTGGCT GGGGCGGACT GCCCGGGCCG
CTGAAGGATC TGTTCGACGG TGGCATCCTG CGTTGGGTGG CGGCAGCGGT GGTGTTGCTG
GTGCTGTTCT CCAGCTTCCA GCTGATCGGC GAACAGCAGC GTGGCGTGGT GCTGCGCTTC
GGCCAGTTCT CGCGCATCCT CACCCCAGGT CCGAACTTCA AGTTGCCGTG GCCGATCGAA
TCGGTCACCA AGGTCAACGC CACCGAGATC AAGACGTTCT CGATCCAGGT GCCGGTGCTG
ACCCGCGACG AGAACATCGT CAACGTCTCG CTGAACGTCC AGTACCGCAT CGACGACCCG
CAGCAGTACC TGTTCGGCAC GGTTGATGCC AACCAGGTGC TGGAGCAGTC GGCGCAGAGC
GCGGTGCGCG AGGAAGTCGG CCGTGCCGAC CTCAACGCGG TACTGAACAA CCGTGGCCCG
CTGGCCGTGG CCGCCGAGGA GCGCCTGCAG GCGCTGCTGA AGGCGTTCAA GACCGGCCTG
ACCGTGACCG GCCTGACCCT GCAGGACGCC CGTCCGCCGG AGGAAGTGAA GCCGGCCTTC
GACGAGGTCA ACGGTGCCCA GCAGGTCAAG GAACGCCTGA TCAACGAAGC CCAGGCCTAT
GCCGCCAAGG TCGTGCCGGA AGCCCGAGGC CAGGCCTCGC GTGCCCGTAC CACTGCCGAA
GGCTACAAGC AGGCCGTGGT GTCCAAGGCC GAGGGTGACG CGCAGCGCTT CAGCCTGCTG
CAGGCCCAGT ACAAGGACGC CCCGGAAGTG ACCCGCAAGC GCCTGTGGCT GGAGACCGTG
CAGCAGGTGT TGAGCGAGAA CCGCAAGGTG ATCGGTGGCG ATGGCCGCCA GCTGATCTAT
GTGCCGATGA CCGGCGATAC CCGTCCCACT ACCTCGGCCC CGCCGGGGGT GACCAATCCG
GAGGTGGTGA TGCCGTCGCT GCCGGGCGCA GCGGTGGAAG CTTCCCGTGA TCCGGGCCGG
CCGGTGGGCC GCCCGACCGG GCGACCGAGC GGCCGTGAGG AGGGCAGCCG ATGA
|
|---|
| Protein sequence | MAWNTPGGNK GGQGPEDKRR GPFGTRGGGN GGGWGGLPGP LKDLFDGGIL RWVAAAVVLL
VLFSSFQLIG EQQRGVVLRF GQFSRILTPG PNFKLPWPIE SVTKVNATEI KTFSIQVPVL
TRDENIVNVS LNVQYRIDDP QQYLFGTVDA NQVLEQSAQS AVREEVGRAD LNAVLNNRGP
LAVAAEERLQ ALLKAFKTGL TVTGLTLQDA RPPEEVKPAF DEVNGAQQVK ERLINEAQAY
AAKVVPEARG QASRARTTAE GYKQAVVSKA EGDAQRFSLL QAQYKDAPEV TRKRLWLETV
QQVLSENRKV IGGDGRQLIY VPMTGDTRPT TSAPPGVTNP EVVMPSLPGA AVEASRDPGR
PVGRPTGRPS GREEGSR
|
|---|
| |