| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2992 |
|---|
| Symbol | |
|---|
| ID | 6475809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3332295 |
|---|
| End bp | 3333008 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642732187 |
|---|
| Product | two component transcriptional regulator, winged helix family |
|---|
| Protein accession | YP_002029374 |
|---|
| Protein GI | 194366764 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.785285 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0463811 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCTGT TGGTGATCGA GGACAACCGC CAGCTGGTGG CCAACCTGTT CGACTATTTC
GAGTCGCGCG GGCACGTGCT CGACGTGGCT CCGGATGGCA TCACCGGCCT GCATCTGGCC
GGCAGCCACC CCTACGATGC GGTGATCCTG GACTGGATGC TGCCGCGCAT GGAGGGCCCC
GAGGTGCTGC GCCGGCTGCG CGCCGAGCAC GCGTCGGAGG TGCCGGTGAT CATGCTGACC
GCGCGCGATG AGCTGCCGGA CAAGATCGCA GGCTTCCGCG CTGGAGCCGA TGATTACCTG
ACCAAGCCGT TCGCGCTGCC CGAGTTGGAG GTGCGGCTGG AGGCCCTGCT GCTGCGCGCG
CAGGGGCGCA ACCCGCGCAA GCGGCTGCAG GTCGGCGACC TGGTGCTGGA CCTGGCGACC
CTGGAGGCCC AGCGAGAGGG CCAGGTGCTG CACCTGTATC CGGCCTGCCG CAAGTTGCTG
GAGGTGCTGA TGCGGGCCAG TCCCGGTGCG GTCACCCGCC AGCAGCTGGA ATTTGCCCTG
TGGGGCGACG AGCCGCCGGA CGGCGACCTG CTGCGCTCGC ATGTCTACGA GCTGCGCCGC
AGCGTCGATG GGCCGTTTGG CGAAAAGCTG ATCCATACCC TGCCGCGGGT TGGTTATCGG
TTGGCCGTGA CCACCGGCAG CGACGCTGGC AAGGATCCTG ATGAAGGTGC GTAA
|
|---|
| Protein sequence | MRLLVIEDNR QLVANLFDYF ESRGHVLDVA PDGITGLHLA GSHPYDAVIL DWMLPRMEGP
EVLRRLRAEH ASEVPVIMLT ARDELPDKIA GFRAGADDYL TKPFALPELE VRLEALLLRA
QGRNPRKRLQ VGDLVLDLAT LEAQREGQVL HLYPACRKLL EVLMRASPGA VTRQQLEFAL
WGDEPPDGDL LRSHVYELRR SVDGPFGEKL IHTLPRVGYR LAVTTGSDAG KDPDEGA
|
|---|
| |