| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2979 |
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| Symbol | |
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| ID | 6475796 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3316804 |
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| End bp | 3318339 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642732174 |
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| Product | protease Do |
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| Protein accession | YP_002029361 |
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| Protein GI | 194366751 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.037466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.016499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTCCCC GACTCCGCAC GCAGGCCATT GGCCTGTTCG CCCTGACCCT GCCGCTGGTG
GCCTGTGCCC AGCCAGCGCC GCCTGCCGCC CAGCCCCAGG CCGCCGCTGC AGCAGCCCCG
CGCGCGCCGG CGCAGCCGCT GGTCAGCGGC CTGCCCGATT TCACCCATCT GGTCGAACAG
GTCGGGCCGG GCGTGGTCAA CGTCGACACC ACCATCGTGC GCAACAACCG CCAGGCCTCG
CGTGGCCCGA TGGGCGGCGA CGATGACATG CCGGAATTCT TCCGTCGCTT CTTCGGGCCT
GACTTCCCGA TGCCGGGGCA GGGGCCGGGC GGGCAGGACG GTGGCCCCAG CATCAAGGGC
CGCGGCATGG GCTCGGGCTT CATCATTTCG CCCGACGGCT ACGTGCTGAC CAACTACCAC
GTGGTGGCTG ACGCCAGCGA GGTGAAGGTC AAGCTGGGTG ACAGCCGCGA ATTCAACGCC
AAGGTGGTGG GCAGTGACCA GCAGTACGAC GTGGCCCTGC TGAAGATCGA CGGCAAGAAC
CTGCCGACCG TGCGGGTGGG CGATTCCAAT ACCCTGAAGC CGGGCCAGTG GGTTGTCGCG
ATCGGCTCGC CGTTCGGCCT GGACCACTCG GTCACCGCCG GCATCGTCAG CGCGCTGGGC
CGCAGCACCG GTGGCGCTGA TCAGCGCTAC GTGCCGTTCA TCCAGACCGA CGTGGCGATC
AACCAGGGCA ACTCCGGCGG CCCGCTGCTG AACACCCGCG GCGAAGTGGT CGGCATCAAC
TCGCAGATCT TCTCCGCCTC GGGCGGTTAC ATGGGCATCA GCTTCGCGAT TCCGATCGAC
CTGGCGATGA GCGCGGTCGA GCAGATCAAG AAGAGTGGCA AGGTCACCCG TGGCCAGCTG
GGCGCGGTGG TCGAGCCGAT CGATGCGCTG AAGGCGCAGG GCCTGGGCCT GCCGGACAGC
CGTGGCGCGC TGGTCAACCA GATCGTGGCC GGCAGCGCGG CGGAAAAGGC CGGCGTGCAG
ATCGGTGACG TGGTGCGCTC GGTCAATGGC AGCCCGGTCA ACAGCTGGTC GGACCTGCCG
CCGCTGATCG GTGCGATGGC GCCGGGCAGC CGGGTCACGC TGGGCGTGAT CCGCGACGGC
AAGCCGCGTG ACCTGAGCGC CACGCTGACC GCGCTGAGCG AAGACGGCCA GGGCAATGCC
CGCACGGCCG CAGGACCCAA GCCCGATGCG GCGCCGCAGG CAGGTGCCAA TGCACTGCTT
GGCCTGGATG TCAGTGATCT GACTGCGCCG CAGCGCAAGC AGTTCGGCCT GGACGGCAAC
GAAGGTGTGC GCATCACCGG GGTCAAGGGC CAGGCGGCAC GTGACGCGGG CCTGTCGCCG
GGCATGGTGA TCCTGCAGGT CGGCCGCACC ACGGTCGGCA GCGTGGATGC CCTGAACCGC
GCGCTGTCCA GCTACAAGAA GGACGATGTG GTGATGCTGC TGGTACGTAC CGGCAACGGC
AACAGCGCCT TCGTGGCGGT CAAGGCCGGC CAGTAA
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| Protein sequence | MTPRLRTQAI GLFALTLPLV ACAQPAPPAA QPQAAAAAAP RAPAQPLVSG LPDFTHLVEQ
VGPGVVNVDT TIVRNNRQAS RGPMGGDDDM PEFFRRFFGP DFPMPGQGPG GQDGGPSIKG
RGMGSGFIIS PDGYVLTNYH VVADASEVKV KLGDSREFNA KVVGSDQQYD VALLKIDGKN
LPTVRVGDSN TLKPGQWVVA IGSPFGLDHS VTAGIVSALG RSTGGADQRY VPFIQTDVAI
NQGNSGGPLL NTRGEVVGIN SQIFSASGGY MGISFAIPID LAMSAVEQIK KSGKVTRGQL
GAVVEPIDAL KAQGLGLPDS RGALVNQIVA GSAAEKAGVQ IGDVVRSVNG SPVNSWSDLP
PLIGAMAPGS RVTLGVIRDG KPRDLSATLT ALSEDGQGNA RTAAGPKPDA APQAGANALL
GLDVSDLTAP QRKQFGLDGN EGVRITGVKG QAARDAGLSP GMVILQVGRT TVGSVDALNR
ALSSYKKDDV VMLLVRTGNG NSAFVAVKAG Q
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