Gene Smal_2977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2977 
Symbol 
ID6475724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3313981 
End bp3314775 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content64% 
IMG OID642732172 
Productsignal peptidase I 
Protein accessionYP_002029359 
Protein GI194366749 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0323133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00413719 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACTGT TTGAGATCCT CCTGGTCGTG CTGACCCTGT CCTCGGGCCT GATCCTGCTC 
GCGGACAAGC TGTACCTCGC CAAGCGCCGC GCCCAGCGCG CAGGCCTGCT CGATTCCGAG
CCGGTGCTGG TGGACTACTC GCGTGCGTTC TTCCCGGTGC TGGCGATCGT GCTGATCGTG
CGCAGCTTCA TCGCCGAGCC GTACAAGATT CCGTCCAGCT CGATGATGCC GAACCTGCTG
ATCGGCGACT TCATCCTGGT CAACAAGTTC TCCTATGGCC TGCGCCTGCC GATCAGCAAC
ACCAAGTTCG TGCCGGTCGG TGAACCGTCG CGCGGTGACG TGGTGGTGTT CCACTTCCCG
GGCCATAGCG ACCAGGATCC GGCCAAGGGC GAGAACTTCA TCAAGCGCGT GATCGGCGTG
CCGGGCGACA CCGTGGTCTT CGAAGGCGAC GGCGTGATCC TCAACGGCGA GCCGCTGAAG
TACGACAACA AGGGTATCTA CGCCGGCCAC AAGGGCCAGG GCGAAGGTGC CAACCTGCTG
GTCGAGCACC TCCCGGGCCG TACCCATACC GTGCTGGAGA CCGACTATCC GCGCGGCCAG
GGCCAGTGGA CCGTGCCCGC CGGCAAGTAC CTGGTGATGG GCGACAACCG CGACAACAGC
GACGATGGTC GTTTCTGGGG CCTGCTGCCG GAAGAGAACC TGCGCGGCAA GGCGTTCCTG
ATCTGGCTCA ACTGCCAGGG CTGGTTCTGC AAGGATGGCT TCGAGCCGTC GCGGATCGGC
TCGAGCATCA ACTGA
 
Protein sequence
MKLFEILLVV LTLSSGLILL ADKLYLAKRR AQRAGLLDSE PVLVDYSRAF FPVLAIVLIV 
RSFIAEPYKI PSSSMMPNLL IGDFILVNKF SYGLRLPISN TKFVPVGEPS RGDVVVFHFP
GHSDQDPAKG ENFIKRVIGV PGDTVVFEGD GVILNGEPLK YDNKGIYAGH KGQGEGANLL
VEHLPGRTHT VLETDYPRGQ GQWTVPAGKY LVMGDNRDNS DDGRFWGLLP EENLRGKAFL
IWLNCQGWFC KDGFEPSRIG SSIN