Gene Smal_2968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2968 
Symbol 
ID6475715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3306022 
End bp3307029 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content68% 
IMG OID642732163 
Productbeta-hexosaminidase 
Protein accessionYP_002029350 
Protein GI194366740 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1472] Beta-glucosidase-related glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0265184 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000639415 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGCTGA TCGGCGTTGC CGGCACCGAA CTGACTGCCC AGGAGCGTGA CTGGTTGCAG 
CACGATGCCG TGGCCGGAGT GGTGCTGTTC AAGCGCAACT TCGCCTCGCG CCAGCAGGTG
ACCGATCTGA GCGCGGCGAT CCGTGCCGCC GCCCCGCGCC CGCAGCTGAT CTGCGTGGAC
CAGGAAGGCG GCCGTGTGCA GCGTTTCCGC GAAGGCTACA GCGAGCTGCC GCCGCTGCAG
GACATCGGTG CGCTGTACGC CACCGACCCG CAGCAGGCGC TGGCCCTGGC CGAGCAGCAC
GCCTGGCTGA TGGCCAGCGA AGTGCGGGCC AGCGGCCTGG ACCTGAGTTT TGCGCCGGTG
GTCGATCTCG GTCGTGGCAA CCGCGCCATC GGCAACCGTG CCTTCAGTGA AGACCCGCAG
GTGGTTGCCG CGTTCACTGC CGCCTACGTG CGCGGCATGC ACGCGGTCGG CATGGCGGCC
ACGCTCAAGC ATTTCCCCGG TCACGGCACC GTGCTGGAAG ATACCCACGT GGATACCGCG
ATCGATCCGC GTGCGCTCGA TGAGCTGCGC GCGCAGGATC TGGTGCCGTT CCAGGCCGGC
ATCGCCGCCG GTGCCGACGC GGTGATGATG GCGCACGTGG TCTATCCGCA GGTTGCGCCT
GAGCCGGCCG GCTATTCCCC GCGCTGGATC CAGGACATCC TGCGTGGCGA GCTCGGCTTC
CGCGGCGTGG TGTTCTCCGA CGACATCGGC ATGGCTGCTT CGCACAGTGC CGGCGGTGTG
CCGGCACGCG TGCACGCGCA CCTGGATGCC GGCTGCGACG TGGTGCTGGT CTGCCACCCC
GAACTGGTCG ATGAAGCCCT GCACGCGGTG CAGGGACGCT CCCTCAATAC TGCTGCGCTG
CTGGGCCTGC TCGGTCGCGG CGCGCTTGGT TGGGACGGCC TGTTGGCCGA TGCCCGCCAT
GGCGACACCC AATCCCATTT GCTTGAAACC CTTGGAAGAA CCGTCTGA
 
Protein sequence
MLLIGVAGTE LTAQERDWLQ HDAVAGVVLF KRNFASRQQV TDLSAAIRAA APRPQLICVD 
QEGGRVQRFR EGYSELPPLQ DIGALYATDP QQALALAEQH AWLMASEVRA SGLDLSFAPV
VDLGRGNRAI GNRAFSEDPQ VVAAFTAAYV RGMHAVGMAA TLKHFPGHGT VLEDTHVDTA
IDPRALDELR AQDLVPFQAG IAAGADAVMM AHVVYPQVAP EPAGYSPRWI QDILRGELGF
RGVVFSDDIG MAASHSAGGV PARVHAHLDA GCDVVLVCHP ELVDEALHAV QGRSLNTAAL
LGLLGRGALG WDGLLADARH GDTQSHLLET LGRTV