Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2961 |
Symbol | |
ID | 6475708 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3299429 |
End bp | 3301888 |
Gene Length | 2460 bp |
Protein Length | 819 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642732156 |
Product | DEAD/H associated domain protein |
Protein accession | YP_002029343 |
Protein GI | 194366733 |
COG category | [R] General function prediction only |
COG ID | [COG1201] Lhr-like helicases |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000136531 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGACCCGCA GCGAGGCGCT GCGCCGGCTG GAAGACTGGT TCGCAGCGCG AGGCTGGCGC TCACTGCCGT TCCAGCGCGC GATGTGGCGG CACTATCTCG CCGGCGAATC CGGGTTGCTG CATACGCCCA CCGGCAGCGG CAAGACGCTG GCGATGTTCG GTGGCCCCCT GCTGCAGGCG ATGATCGATC CGCCGTCGGC TCCCCGCCGC GCAAGTGCGG TGCGTCCGCT GCAGGTGCTG TGGGTCACGC CCTTGCGCGC ATTGGCCAGC GACACTGCAC GTGCACTGCA GACCGTGGTC GATGGACTGG GACTGGGCTG GCGCGTCGGG CTGCGCAGTG GCGACGCCAG CAGCCACGAA CGCCGACAGG CACGCGAGGG CCGTGTCGAT GTGCTGGTGA CTACGCCGGA ATCATTGGCG CTGCTGCTGA GCTATCCGGA TACGCTGCCG CGCATGCGCC AGCTGCGCTG CGTGGTGGTG GACGAATGGC ACGAACTGCT GGGCAACAAG CGCGGCGTGC TGCTGCAGTT GAACCTGGCG GTGCTGCGCG GCGCCGCCCC CGCGCTGCAG CTGTGGGGGC TGTCGGCCAC GCTGGGCAAT CTTGCCCAGG CGCGCGACGT GCTGCTGCCC GACCGTCCGG ACGCACCGAC CGTGCAAGGC GTCCGCCCGC GCCCGATCAC GGTACGCAGC CTGCTGCCCG AACCGGGCGA ACGTTTTCCG TGGGCGGGGC ATCTTGGCCT TGCACAGCTG CCGCGTGTGC TGGACGCGCT GATGCAGGCG CGCAGCAGCC TGTTGTTCAC CAACACCCGC GCGCAGGCCG AACTGTGGCA CCAGGCGTTG GCCGCGGTCT GGCCGGAAGA CCCGCAAACG CTGGCGCTGC ACCACGGCTC GCTGGATCCG GCGCTGCGCC AGCAGGCGGA GGACGGCCTG CGTGCAGGCG CCCTGCGCTG CGTCGTCGCC ACATCCAGCC TCGACCTGGG CGTGGATTTT CCGGAGGTCG AACAGGTGCT GCAGCTGGGC AGCCCGAAGG GCGTGGCACG CCTGCGGCAA CGCGCAGGCC GCGCGCGCCA TCGTCCCGGT ACCAGCGGCG CTGTCCTGTG CATTCCCAGC CACGCGCTGG AACTGGCCGA GTACGCGGCC GTGCGCCGCG CGTTGCGTGA AGGCGTGGTC GAAGCACGGC GACCGCCGAC GCTGTCGCTG GATGTACTGG CCCAGCATGC GGTCAGCCGC GCGCTCGCCG GCGGCTTCGA CAGCGATGCG TTGCTGGCGC AGGTACGACG CACCCATGCC TTCGCCGCAC TTGCTGATGA TCAGTGGCAG GCGGTGCTGA CATTCATCGT GCAGGGCGGC CAGGCGTTGG CCCAGTACCC CGATTTCCAC AAGGTGGTGC AGGACGCCGA TGGCCACTAC CGCATGCATG ATCGCCGCCA GGCGCTGCGC CACCGGTTGT CGATCGGCAC CATCAGCAGC GATGGCAGCG TTCGCGTGCA GTTCCTGCGC GGCGGAGGCC TGGGCGCGGT GGAGGAACAG TTCGCCAGCC GTCTGCGCCG CGGTGATCGT TTCCAGTTCG CGGGCCGCCT GCTTGAGCTG GTGCAGCTGC GCGACATGAC CGCCTTCGTG CGGCTGGCGC GCGGAGCTGG CGACGGCGTT GTGCCGCGCT GGCAGGGTGG CCAACTGCCG TTGTCGATGG CGCTCGGGCA CGAACTGGAA GCGGTCCTGT CAGGGGCCGA CGCGAGTGCC GAATCACGCT GGCTGGCACC GCTGCTGGCA CTGCAGGAGC AGCTGTCCGC ACTTCCGGGG CGGGACCGCC TGCTGGTGGA GGAGGTGCGG CGCCGTGAGG GCCAGTTCCT GTTCGTGTTT CCGTTTGCCG GCCGTCACGT TCACGAGGCA CTGGCCGCGC TGCTGGCACT GCGCCTCACG CGCCTGCAGC GCAACAGCAT CGGCTATGCG GTGAACGACC ACGGCCTGGT GCTGGCACCG GCACAGGCGG TCGATCTGGA CGCGCAGCAG TGGCCGGCCC TGTTCACCAC CGATCAACTG CTCGATGACC TGCGCGCTGC GGTGAACCTC GGTGAGCTGG CACGCCGCCA GTTCCGTGGC ATCGCACGCG TAGCGGGCCT GCTGGTCCCC AGCCTGCCGG GCGGTATGCC GCGTTCGCTG CGCCAGCTGC AGGCCTCGGC AGGCCTGCTG TACGACGTGC TGCGCGAGCA CGATCCCGAC CATCTGCTGC TGGCATTGGC CGAACACGAA GTGCTGCACG ACAGCCTGGA CCTTCCCGGC CTGCAGCAGG TACTGGCGAG GATCGGTACA CAGTCCCTTT CGGTACAGCG CCCTTCATCA CTCACACCGC TGGGTTTTCC GCTGTGGGCC GAGCGGCTGC GCGGGCAGTT CAGCAACGAA GACTGGCGGA CCCGCGTGCA GCGCGCCGCA CACCAGCTGG AACGCCGCCA TGGCCGATGA
|
Protein sequence | MTRSEALRRL EDWFAARGWR SLPFQRAMWR HYLAGESGLL HTPTGSGKTL AMFGGPLLQA MIDPPSAPRR ASAVRPLQVL WVTPLRALAS DTARALQTVV DGLGLGWRVG LRSGDASSHE RRQAREGRVD VLVTTPESLA LLLSYPDTLP RMRQLRCVVV DEWHELLGNK RGVLLQLNLA VLRGAAPALQ LWGLSATLGN LAQARDVLLP DRPDAPTVQG VRPRPITVRS LLPEPGERFP WAGHLGLAQL PRVLDALMQA RSSLLFTNTR AQAELWHQAL AAVWPEDPQT LALHHGSLDP ALRQQAEDGL RAGALRCVVA TSSLDLGVDF PEVEQVLQLG SPKGVARLRQ RAGRARHRPG TSGAVLCIPS HALELAEYAA VRRALREGVV EARRPPTLSL DVLAQHAVSR ALAGGFDSDA LLAQVRRTHA FAALADDQWQ AVLTFIVQGG QALAQYPDFH KVVQDADGHY RMHDRRQALR HRLSIGTISS DGSVRVQFLR GGGLGAVEEQ FASRLRRGDR FQFAGRLLEL VQLRDMTAFV RLARGAGDGV VPRWQGGQLP LSMALGHELE AVLSGADASA ESRWLAPLLA LQEQLSALPG RDRLLVEEVR RREGQFLFVF PFAGRHVHEA LAALLALRLT RLQRNSIGYA VNDHGLVLAP AQAVDLDAQQ WPALFTTDQL LDDLRAAVNL GELARRQFRG IARVAGLLVP SLPGGMPRSL RQLQASAGLL YDVLREHDPD HLLLALAEHE VLHDSLDLPG LQQVLARIGT QSLSVQRPSS LTPLGFPLWA ERLRGQFSNE DWRTRVQRAA HQLERRHGR
|
| |