| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2942 |
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| Symbol | |
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| ID | 6475689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3279529 |
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| End bp | 3280107 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642732137 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_002029324 |
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| Protein GI | 194366714 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00874185 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.936687 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACA CCACCATGCC CGCGCCGCCT GCCGCCAACG ACGCCGTCGA CGAACCCGCT
CTGGTGCGGG CGGCGGCCGC TGGCGACACC GCTGCCTATG AACTGCTGTA CCGGCGCCAT
GCACCGCGCG TGTTCGCCGT GTTGTGGCGG CTGTGCGGCG GCCAGCAGGC ACGTGCAGAA
GACGCATTGC AGGAAGCGTT CCTGCAGGCG TGGAAGGCGC TGCCGGGGTT CCGTTTCGAG
AGCAGCCTGT CGACCTGGCT GCATCGCCTG GGCGTCAACG CCGCGCTGAT GGAACTGCGT
GGGCGTGCTG CCGGGCAGGA TCACGACAGC CTCGACGAAG TGGACGGAGG GTTGCAGGAA
CTGGCAGTGC ACGACCGCTG CGCCGGCACC GAACGCGATC TCGAACGGGC GCTGTCGACG
CTGCCACCAC GGGCACGTGC AGTACTGGTA CTGCACGACA TCGAAGGCTG GAAACACCAG
GAAATCGCCG AGCAGTTGCA GATGGCCGTC GGCAGTTCCA AGGCACAGTT GCATCGTGCG
CGCGGCTTGT TGCGCGCACG GCTGGGAGAC ATGACATGA
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| Protein sequence | MLDTTMPAPP AANDAVDEPA LVRAAAAGDT AAYELLYRRH APRVFAVLWR LCGGQQARAE
DALQEAFLQA WKALPGFRFE SSLSTWLHRL GVNAALMELR GRAAGQDHDS LDEVDGGLQE
LAVHDRCAGT ERDLERALST LPPRARAVLV LHDIEGWKHQ EIAEQLQMAV GSSKAQLHRA
RGLLRARLGD MT
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