Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2930 |
Symbol | |
ID | 6475677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3268522 |
End bp | 3271086 |
Gene Length | 2565 bp |
Protein Length | 854 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642732125 |
Product | protein of unknown function DUF470 |
Protein accession | YP_002029312 |
Protein GI | 194366702 |
COG category | [S] Function unknown |
COG ID | [COG0392] Predicted integral membrane protein [COG2898] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.58792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCCC CCTCCGATTC CATCGCTCCC CCTTCCACGC CCACCTGGAA GCGGGTCGCC ACCATCGTCA TCCCGCTGCT GATCCTGGCA CTGGCCCTGC ATGGCCTGGC CGGTGAATTC GACGAGCATG GCTACCGTGC CATCCGCCAG GCCTTCCGCC AGCTCAGCGG CACCCAGATC GCGCTTACCG TGGTACTTGG CCTGGCCAGC TACGCCTGCC TGATCGGCTT CGACGCCATC GGTCTGCGCC GCAGCGGCAT CCGCGTGCAT CCAGCGCGCA TCGGCATCAC CGCTTTCCTC GCGCATACCC TCGGCCAGAC CGTGGGCTTT GCCGCGCTGA CCGGCGGCGC GGTACGCCTG CGCGGCTACC GCAGCGCCGG CCTGGACCTG GCGCAGATCG GGCAGGTGGT GCTGATGAGC ACGCTCGGTT TCGTGTTCGG TGCGTGGCTG TTGATCAGCG TGGCGCTGTG CATGGAGCCG GCAGCCGCGG CATTGGCGTT GCCGTTGAAT CCAGACGCGG TGCGCGTGGT CGGCGTGGCC GCCCTGCTCG CATTTGTGGG CACCGTGCTG CTGGTCGGCC GCGAGGGACG GCAGTTCAGC GTGTTCGGCC ATGCACTGTG GTTGCCCGAC CGCCGCACCA TGCTGGGTGT CACCGTACTC AGCGTCATCG AGCTGGTGCT GGCCAGTGCT GCGTTCTATG TGCTGCTGCC CGACTCCACG CCCACCGGCC TGCCCGGCTT CGTCGGCCTG TACCTGGTGG CGGTGCTGGC CGGCCTGGTC TCGACCGTGC CGGCGGGCCT GGGCGTGTTC GAGTGGAGCC TGCTGAAGCT GCTGCCGCAG GTAGCCCCGG CAGCGGTGCT GGCCGCAGCG CTGATCTACC GCGTCACCTA CTACGTGCTG CCGCTGCTGC TGGCCACCCT GCTTGCCCTT GCGCCCGCGC TGCGGCAACC GCTGCAGGCC AGTGCCGGAG CAACCCGTGC CGGCTGGAAC GCGCTGCGCC CGTGGCTGCC GCAGATCATC GCGCTGGCCG TGTTCAGCAT CGGCGCCGCG CTGGTCATCG ATGGCACGCT GCCAACGCCA CGCCGCCATC TGGTCGGCGC TTCGCTGCCG ATCCTGGAAA CCTCGCACCT GATCGGCAGT CTCAGCGGTG TCGCCCTGCT GCTGATCGGA CAGGGTCTGG CGAGGCGCAG CCATGCCGCG TGGATGCTGG CGATGGCGGT GTGCGTGATC ACCCCGCTGC CGTTGTGGCT GCGCGGTGGC CAACTGCTGA TCGCCGTTTC TGCGCTGCTG GTGGCGATGG CGCTGTGGGC CGCACGCCGC GAGTTCTACC GCCAGGGTGC ACTGCTCGAT GAAGCCTGGT CATGGCCATG GCTGCGCAAC CTCGGGCTGG TGCTGGTGGC GGTCACTTGG CTGCTGTTCT TCACCTACAG CCACGTCGAG TACCAGAACG AGCTGTGGTG GCAGTTCGCG GTGTCGGGCA ATGCACCGCG CGCGCTACGT GCGTTGCTGG TGGTCGCGAT CGCGCTGGTG ATGTTCGGCC TGGCGCGATT GCTGCACAGC ACGCGCAGCC CACTGCGACC CGCCGACGAG GCTACGTTGC AGTCACTGGC ACCCGTGCTG GCTGGCGCCA CTGATACCCA GGCCTGCCTG GTGCTGACTG CCGACAAGGC AGTGCTGCGC GATGAGGCCA AGCAGGGGTT TGTGATGATG CAGCGCTATG GCGGTTCGCT GATCGCCATG GGCGATCCGG TCGGTCCACC GGATGTGGCG CGCGCCTTGA TCTGGCGCTT CCGCGAGGAA GCCGACCGGC TCGGGCTGCG GCCGGTGTTC TACCAGGTCG GTGAAACCTA TTGGCAGACC TATCTCGACC TCGGCCTGGG CCTGGTCAAG CTGGGCGAAG AAGCGATGGT ACCGCTGCAT GATTTCGGGC TGGAGGGACG CGAGCGTGCC GACCTGCGCC AGGCCTGGAA CCGCGGCAAG CGCAGCGGCC TGTCCTTCCG CGTGGCATCG GTGGAAGAGA TCCCAAGCCT GCTGCCGCGC CTGCACGCGA TCTCCAACGC ATGGCTGGAA GACAAGGCCG GCGACGAGAA GGGCTTCTCG CTCGGCAGTT ACGACCCGGA TTACCTGGTG CGCTTCCCGG TGGCACTGGT CGAGGCCGAG GGCCAGATCG TGGCGTTCGC CAACCTGTGG CAGGCACCGG CCGGTGCCGA GCTGTCGGTG GACCTGATGC GCCACGTCAA CGAGGCTCCG AAGGGCACGA TGGACTTCCT CTTCATCGAG CTGTTCCTGT GGGGCCGCGC ACAGGGCTAT GCGCGTTTCT CGCTGGGCAT GGCGCCGTTG TCCGGGCTGG CCCAGCATCG ACTGGCCGGG CGCTGGAACC GGCTGGCCGG CCTGCTGGCA CGGCACGGCG AGCGCTTCTA CGGGTTCAGT GGCCTGCGCC GCTTCAAGTC CAAGTTCGAC CCGCAATGGC GGCCGCGTTA TCTGGCCGCC CCCGGTGGCA TGCACCTGCC GGCCGCGCTG CTCGATGCCA CCCGGCTGAT CTCGCTGGAT CCGCGGCGGA ATTGA
|
Protein sequence | MTAPSDSIAP PSTPTWKRVA TIVIPLLILA LALHGLAGEF DEHGYRAIRQ AFRQLSGTQI ALTVVLGLAS YACLIGFDAI GLRRSGIRVH PARIGITAFL AHTLGQTVGF AALTGGAVRL RGYRSAGLDL AQIGQVVLMS TLGFVFGAWL LISVALCMEP AAAALALPLN PDAVRVVGVA ALLAFVGTVL LVGREGRQFS VFGHALWLPD RRTMLGVTVL SVIELVLASA AFYVLLPDST PTGLPGFVGL YLVAVLAGLV STVPAGLGVF EWSLLKLLPQ VAPAAVLAAA LIYRVTYYVL PLLLATLLAL APALRQPLQA SAGATRAGWN ALRPWLPQII ALAVFSIGAA LVIDGTLPTP RRHLVGASLP ILETSHLIGS LSGVALLLIG QGLARRSHAA WMLAMAVCVI TPLPLWLRGG QLLIAVSALL VAMALWAARR EFYRQGALLD EAWSWPWLRN LGLVLVAVTW LLFFTYSHVE YQNELWWQFA VSGNAPRALR ALLVVAIALV MFGLARLLHS TRSPLRPADE ATLQSLAPVL AGATDTQACL VLTADKAVLR DEAKQGFVMM QRYGGSLIAM GDPVGPPDVA RALIWRFREE ADRLGLRPVF YQVGETYWQT YLDLGLGLVK LGEEAMVPLH DFGLEGRERA DLRQAWNRGK RSGLSFRVAS VEEIPSLLPR LHAISNAWLE DKAGDEKGFS LGSYDPDYLV RFPVALVEAE GQIVAFANLW QAPAGAELSV DLMRHVNEAP KGTMDFLFIE LFLWGRAQGY ARFSLGMAPL SGLAQHRLAG RWNRLAGLLA RHGERFYGFS GLRRFKSKFD PQWRPRYLAA PGGMHLPAAL LDATRLISLD PRRN
|
| |