Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2904 |
Symbol | |
ID | 6475650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3239131 |
End bp | 3241965 |
Gene Length | 2835 bp |
Protein Length | 944 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642732098 |
Product | TonB-dependent receptor |
Protein accession | YP_002029286 |
Protein GI | 194366676 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAAACACC CGATCCAACG GCCCGCCAGC CGCCGCCGCT CCACCCTGGC ATCGTCCATC ACCCATATCC TTACCGGCGG CACCCTGCTG CTGGTTGGCG CCGTGGCTTC CACCTCCGCC TTCGCGCAGG AAAAGGCCAC CAACCTGGAC CGGATCACGG TCACCGGCTC GAACATTCCG CGCACCAACA CCGAAACACC GTCCCCGGTG CAGGTGGTGA CCCGCCAGGA AATCGACCGT ACCGGCAAGA CCACGGTTGC TGAATACCTG CAGACATTGA CTGCCGATGG TTCCGGCTCC ATTCCCAAGA CCTTCGGCAA CGGCTTCGCC GGCGGTGGCG CCGGCATTTC GTTGCGTGGT CTGGGCGCGG GTTCGACCCT TGTCCTGCTG AATGGCCGCC GCATGGCCAC CTATGGCCTG GCCGATGACG GCCAGAAGGT CTTCACCGAC CTGAGCACCA TCCCGCTCGA CGCCGTTGAA CGCGTTGAAG TGCTGAAGGA TGGCGCCTCG GCGATCTATG GCTCCGACGC CATCGCCGGC GTGGTCAACA TCATCCTGCG CAGCGATTTC CAGGGTGCGA TCCTTCGCGG TTCCTACGGC GTTTCCGGCG ACGGCGATGG CGACGCGAAG AAGGCGACCC TGACCGCCGG TACCGGCGAC CTCGCCACCG ATGGCTGGAA TGCATTCTTC AGCCTGGATG TCGCCAAGAC CGATGCGATC AAGATCAGCG ACCGCAAGAA CCGCAAGTGG ATCGGTACCG GCGATACCCG CCCGTGGGGC TATGGCAACA ACGCCCAGTT CCTGGGCGGC GCCTTCCTCA GTGGCAAGAC CCGGGGTGGC GTCGGTCCGA ACGGTTCGGT GTATGACGAT CGCAATGTAA CCAAGGAGAA CCCCGCCTTC CTGGTCGCAC TGCCGGGCTG TGCTGGCCTG ACCACGATTC CGGGCCAGAC CGAAGCCTCG GCACAGGCGC AGGGCTGCCT GTGGGATCCG AACCAGCTGT ATCGCGACCT GACCCCCGAA GAGAAGTACA TCAACGTGTT CGGTCGCGCC AGCTTCGCCT TTGGTGAAGG GGGTGAGATC TACACCGAAA TCGGCTACTC GAAGAAGGAA ACGACCTTCA GCAATACACC TTCCGGCGTA TCCGGCAGCT GGGGTTTCCC AGAGGGTCCC GTCAACGGCA ACAGCGGCCC GGGCGCGGTC GTGCTCGGCC CCAACCACCC GGACAATCCG ATCCCGGGCC AGGCCTCGCG CCTGCGCTAT TCGGCATGGG ACGTCGGTCC GCGCGTGACC AACAACACCA ACGAGTTCAC TCGCTTCCTG GTCGGCGTCA AGGGCAACTG GGGTGACTGG AGCTACGACA CCGCATACCT GCACTCCGGC ACCGACCTGG TCAACAAGCG CACCGGTTTC CTCAACTACG ACAACGTACG TTGCGCACTG GCCAATCCGA ACTGCGCCGG TGGTGTTTGG CGCATCGGTG ACAACGCGGG CATGAACTCG CAGGCGTTGT ACGACTTCAT CTCGCCGGAT ATCAGCGCCC GCGCCAAGTC GAGCCTGGAC ATGTTCGACT TCACCGTGTC GCGCAGCCTG ATGGACCTCA AGGGCGGCCC GCTGGGCTTG GCACTGGGTA CTGAATGGCG CAAGACCAGC AACAGCCTGA CCCCGCAGAC CTACACCGAC AAGGGCCAGA TCATTGGTCT GGGCTACTCG GCCTATGACG GCACGCAGAA CGTGTACGCC GGCTACGTCG AACTGTCGGC CCCCGTGCTG GAAAGCCTGG AACTGTCCGG TGCTGTGCGC TACGACAAGT ATGAAAGCGG CGAAGGCAAG GCCACACCGA AGATCGGCAT CAAGTGGACA CCGGCCGACT GGATCGCACT GCGCGGCAGC TATGCCGAAG GCTTCCGTGC ACCGAACCCG GCCGAGAACG GCGATGGCGG CCTGGCAGCG TTCTCCAATG CATCCGATCC GGTGCGCTGC CCGGGCGGCA ACCCGGCACC AGGTGCAAAC GGTGACGACT GTGGCGCCCT GCCGGTCGCC ATCATCACCC GCCCGAACAA GGACCTGAAG CCGGAAGAGT CGAAGAGCTA CTCGGTGGGT ATCGTCCTGC AGCCGACGTC CACGACCTCG CTGACCATCG ATGCCTGGCA GATCAAGCGC ACCAACGAAA TTGCCCAGGG CAGCACTGCC GAGGCAATTG CTGCCGGCAA CGTACTGCGT GACACCAACC TGCTCAATGG CGTACCCGGC ACCGGCAGCA TCCTGGCGGT CAACACGCAG TACATCAACG CCGCATCGAC CCGGGTACGG GGTATCGATA CCGATATCCG CCAGACCTTC GACATCGGTC CGGGTCAGCT GGAGATGGAT CTGCAGTGGA GCCATGTGCT CAAGTTCGAG CGCACCGATG CCGACGTGAC GGTTGACTAC GCGGGTACTC ACGGCAACTG CGACGTGACC AACTGCATCG GCACGCCGAA GGACCGCATC AACTTCGGCA CCACCTGGCG GCAGGGCCCG TGGAGCGTCA GCGGTGTCGC CAACTACATC TCGAAGATGG ACAACAAGGA CTTCCGTGGT CCGGACGGCT CGTATCTGTT CGCGTATGCG GACGGCACCG ACGTCAAGAA GATCTCCTCG TTCACCACGT TCGACCTGTC GGGCCGCTGG AACATCACTG ACGCGTTCGA GTTGAATGCC TCGGTGCAGA ACGTGTTCGA TCGGATTGCG CCGCTGGATC CGTCCACCTA CGGCGGCGTG AACTACAACC CGTTGCACTT CAGCGGTGCC ATCGGTCGTT ACTTCACCGT CGGTGCCAAG TACACCTTCA AGTAA
|
Protein sequence | MKHPIQRPAS RRRSTLASSI THILTGGTLL LVGAVASTSA FAQEKATNLD RITVTGSNIP RTNTETPSPV QVVTRQEIDR TGKTTVAEYL QTLTADGSGS IPKTFGNGFA GGGAGISLRG LGAGSTLVLL NGRRMATYGL ADDGQKVFTD LSTIPLDAVE RVEVLKDGAS AIYGSDAIAG VVNIILRSDF QGAILRGSYG VSGDGDGDAK KATLTAGTGD LATDGWNAFF SLDVAKTDAI KISDRKNRKW IGTGDTRPWG YGNNAQFLGG AFLSGKTRGG VGPNGSVYDD RNVTKENPAF LVALPGCAGL TTIPGQTEAS AQAQGCLWDP NQLYRDLTPE EKYINVFGRA SFAFGEGGEI YTEIGYSKKE TTFSNTPSGV SGSWGFPEGP VNGNSGPGAV VLGPNHPDNP IPGQASRLRY SAWDVGPRVT NNTNEFTRFL VGVKGNWGDW SYDTAYLHSG TDLVNKRTGF LNYDNVRCAL ANPNCAGGVW RIGDNAGMNS QALYDFISPD ISARAKSSLD MFDFTVSRSL MDLKGGPLGL ALGTEWRKTS NSLTPQTYTD KGQIIGLGYS AYDGTQNVYA GYVELSAPVL ESLELSGAVR YDKYESGEGK ATPKIGIKWT PADWIALRGS YAEGFRAPNP AENGDGGLAA FSNASDPVRC PGGNPAPGAN GDDCGALPVA IITRPNKDLK PEESKSYSVG IVLQPTSTTS LTIDAWQIKR TNEIAQGSTA EAIAAGNVLR DTNLLNGVPG TGSILAVNTQ YINAASTRVR GIDTDIRQTF DIGPGQLEMD LQWSHVLKFE RTDADVTVDY AGTHGNCDVT NCIGTPKDRI NFGTTWRQGP WSVSGVANYI SKMDNKDFRG PDGSYLFAYA DGTDVKKISS FTTFDLSGRW NITDAFELNA SVQNVFDRIA PLDPSTYGGV NYNPLHFSGA IGRYFTVGAK YTFK
|
| |