Gene Smal_2904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2904 
Symbol 
ID6475650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3239131 
End bp3241965 
Gene Length2835 bp 
Protein Length944 aa 
Translation table11 
GC content63% 
IMG OID642732098 
ProductTonB-dependent receptor 
Protein accessionYP_002029286 
Protein GI194366676 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4206] Outer membrane cobalamin receptor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACACC CGATCCAACG GCCCGCCAGC CGCCGCCGCT CCACCCTGGC ATCGTCCATC 
ACCCATATCC TTACCGGCGG CACCCTGCTG CTGGTTGGCG CCGTGGCTTC CACCTCCGCC
TTCGCGCAGG AAAAGGCCAC CAACCTGGAC CGGATCACGG TCACCGGCTC GAACATTCCG
CGCACCAACA CCGAAACACC GTCCCCGGTG CAGGTGGTGA CCCGCCAGGA AATCGACCGT
ACCGGCAAGA CCACGGTTGC TGAATACCTG CAGACATTGA CTGCCGATGG TTCCGGCTCC
ATTCCCAAGA CCTTCGGCAA CGGCTTCGCC GGCGGTGGCG CCGGCATTTC GTTGCGTGGT
CTGGGCGCGG GTTCGACCCT TGTCCTGCTG AATGGCCGCC GCATGGCCAC CTATGGCCTG
GCCGATGACG GCCAGAAGGT CTTCACCGAC CTGAGCACCA TCCCGCTCGA CGCCGTTGAA
CGCGTTGAAG TGCTGAAGGA TGGCGCCTCG GCGATCTATG GCTCCGACGC CATCGCCGGC
GTGGTCAACA TCATCCTGCG CAGCGATTTC CAGGGTGCGA TCCTTCGCGG TTCCTACGGC
GTTTCCGGCG ACGGCGATGG CGACGCGAAG AAGGCGACCC TGACCGCCGG TACCGGCGAC
CTCGCCACCG ATGGCTGGAA TGCATTCTTC AGCCTGGATG TCGCCAAGAC CGATGCGATC
AAGATCAGCG ACCGCAAGAA CCGCAAGTGG ATCGGTACCG GCGATACCCG CCCGTGGGGC
TATGGCAACA ACGCCCAGTT CCTGGGCGGC GCCTTCCTCA GTGGCAAGAC CCGGGGTGGC
GTCGGTCCGA ACGGTTCGGT GTATGACGAT CGCAATGTAA CCAAGGAGAA CCCCGCCTTC
CTGGTCGCAC TGCCGGGCTG TGCTGGCCTG ACCACGATTC CGGGCCAGAC CGAAGCCTCG
GCACAGGCGC AGGGCTGCCT GTGGGATCCG AACCAGCTGT ATCGCGACCT GACCCCCGAA
GAGAAGTACA TCAACGTGTT CGGTCGCGCC AGCTTCGCCT TTGGTGAAGG GGGTGAGATC
TACACCGAAA TCGGCTACTC GAAGAAGGAA ACGACCTTCA GCAATACACC TTCCGGCGTA
TCCGGCAGCT GGGGTTTCCC AGAGGGTCCC GTCAACGGCA ACAGCGGCCC GGGCGCGGTC
GTGCTCGGCC CCAACCACCC GGACAATCCG ATCCCGGGCC AGGCCTCGCG CCTGCGCTAT
TCGGCATGGG ACGTCGGTCC GCGCGTGACC AACAACACCA ACGAGTTCAC TCGCTTCCTG
GTCGGCGTCA AGGGCAACTG GGGTGACTGG AGCTACGACA CCGCATACCT GCACTCCGGC
ACCGACCTGG TCAACAAGCG CACCGGTTTC CTCAACTACG ACAACGTACG TTGCGCACTG
GCCAATCCGA ACTGCGCCGG TGGTGTTTGG CGCATCGGTG ACAACGCGGG CATGAACTCG
CAGGCGTTGT ACGACTTCAT CTCGCCGGAT ATCAGCGCCC GCGCCAAGTC GAGCCTGGAC
ATGTTCGACT TCACCGTGTC GCGCAGCCTG ATGGACCTCA AGGGCGGCCC GCTGGGCTTG
GCACTGGGTA CTGAATGGCG CAAGACCAGC AACAGCCTGA CCCCGCAGAC CTACACCGAC
AAGGGCCAGA TCATTGGTCT GGGCTACTCG GCCTATGACG GCACGCAGAA CGTGTACGCC
GGCTACGTCG AACTGTCGGC CCCCGTGCTG GAAAGCCTGG AACTGTCCGG TGCTGTGCGC
TACGACAAGT ATGAAAGCGG CGAAGGCAAG GCCACACCGA AGATCGGCAT CAAGTGGACA
CCGGCCGACT GGATCGCACT GCGCGGCAGC TATGCCGAAG GCTTCCGTGC ACCGAACCCG
GCCGAGAACG GCGATGGCGG CCTGGCAGCG TTCTCCAATG CATCCGATCC GGTGCGCTGC
CCGGGCGGCA ACCCGGCACC AGGTGCAAAC GGTGACGACT GTGGCGCCCT GCCGGTCGCC
ATCATCACCC GCCCGAACAA GGACCTGAAG CCGGAAGAGT CGAAGAGCTA CTCGGTGGGT
ATCGTCCTGC AGCCGACGTC CACGACCTCG CTGACCATCG ATGCCTGGCA GATCAAGCGC
ACCAACGAAA TTGCCCAGGG CAGCACTGCC GAGGCAATTG CTGCCGGCAA CGTACTGCGT
GACACCAACC TGCTCAATGG CGTACCCGGC ACCGGCAGCA TCCTGGCGGT CAACACGCAG
TACATCAACG CCGCATCGAC CCGGGTACGG GGTATCGATA CCGATATCCG CCAGACCTTC
GACATCGGTC CGGGTCAGCT GGAGATGGAT CTGCAGTGGA GCCATGTGCT CAAGTTCGAG
CGCACCGATG CCGACGTGAC GGTTGACTAC GCGGGTACTC ACGGCAACTG CGACGTGACC
AACTGCATCG GCACGCCGAA GGACCGCATC AACTTCGGCA CCACCTGGCG GCAGGGCCCG
TGGAGCGTCA GCGGTGTCGC CAACTACATC TCGAAGATGG ACAACAAGGA CTTCCGTGGT
CCGGACGGCT CGTATCTGTT CGCGTATGCG GACGGCACCG ACGTCAAGAA GATCTCCTCG
TTCACCACGT TCGACCTGTC GGGCCGCTGG AACATCACTG ACGCGTTCGA GTTGAATGCC
TCGGTGCAGA ACGTGTTCGA TCGGATTGCG CCGCTGGATC CGTCCACCTA CGGCGGCGTG
AACTACAACC CGTTGCACTT CAGCGGTGCC ATCGGTCGTT ACTTCACCGT CGGTGCCAAG
TACACCTTCA AGTAA
 
Protein sequence
MKHPIQRPAS RRRSTLASSI THILTGGTLL LVGAVASTSA FAQEKATNLD RITVTGSNIP 
RTNTETPSPV QVVTRQEIDR TGKTTVAEYL QTLTADGSGS IPKTFGNGFA GGGAGISLRG
LGAGSTLVLL NGRRMATYGL ADDGQKVFTD LSTIPLDAVE RVEVLKDGAS AIYGSDAIAG
VVNIILRSDF QGAILRGSYG VSGDGDGDAK KATLTAGTGD LATDGWNAFF SLDVAKTDAI
KISDRKNRKW IGTGDTRPWG YGNNAQFLGG AFLSGKTRGG VGPNGSVYDD RNVTKENPAF
LVALPGCAGL TTIPGQTEAS AQAQGCLWDP NQLYRDLTPE EKYINVFGRA SFAFGEGGEI
YTEIGYSKKE TTFSNTPSGV SGSWGFPEGP VNGNSGPGAV VLGPNHPDNP IPGQASRLRY
SAWDVGPRVT NNTNEFTRFL VGVKGNWGDW SYDTAYLHSG TDLVNKRTGF LNYDNVRCAL
ANPNCAGGVW RIGDNAGMNS QALYDFISPD ISARAKSSLD MFDFTVSRSL MDLKGGPLGL
ALGTEWRKTS NSLTPQTYTD KGQIIGLGYS AYDGTQNVYA GYVELSAPVL ESLELSGAVR
YDKYESGEGK ATPKIGIKWT PADWIALRGS YAEGFRAPNP AENGDGGLAA FSNASDPVRC
PGGNPAPGAN GDDCGALPVA IITRPNKDLK PEESKSYSVG IVLQPTSTTS LTIDAWQIKR
TNEIAQGSTA EAIAAGNVLR DTNLLNGVPG TGSILAVNTQ YINAASTRVR GIDTDIRQTF
DIGPGQLEMD LQWSHVLKFE RTDADVTVDY AGTHGNCDVT NCIGTPKDRI NFGTTWRQGP
WSVSGVANYI SKMDNKDFRG PDGSYLFAYA DGTDVKKISS FTTFDLSGRW NITDAFELNA
SVQNVFDRIA PLDPSTYGGV NYNPLHFSGA IGRYFTVGAK YTFK