Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2900 |
Symbol | |
ID | 6475646 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3235101 |
End bp | 3236588 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642732094 |
Product | ribonuclease, Rne/Rng family |
Protein accession | YP_002029282 |
Protein GI | 194366672 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGAGG AAATCCTGGT CAATGTGACC CCGCGCGAAA CCCGGGTCGC GGTGATCGAG AACGGCATGC TGCAGGAACT GCACATCGAG CGCGGTTGGC GCCGGGGTGT GGTCGGCAAC ATCTACAAGG GCAAGGTGCA GCGGGTCATG CCGGGCATGC AGGCGGCCTT CGTCGAGGTC GGGCTGGAGC GCGCCGCGTT CCTGCACGCC AACGACGTGG TACGGCCGGC GCCGGTGGCC AGCGCCGACA CCGAAAACAC CACGCTGCCA CCGCCGTCCA GCGTGCCGAT CGTCGAACTG CTGCGCGACG GCCAGGACAT CGTGGTGCAG GTGGTGAAGG ATCCGATCGG GACCAAGGGC GCGCGCCTGA CCACGCAGAT CAGCATTCCC TCGCGTTACA TGGTGCTGCT GCCGCAGTCC AAGGTGGTGG GGGTGTCGGC GCGCATCGAG GATGAAGGCG AGCGTGCGCG GCTGAAGGCG CTGGTGACCG AGCTGTCGGC CCAGCATGGC GGCTACGGCT ACATCGTGCG TACCAATGCC GAGGGCCAGC CGGCCGAGGC CATCGCCGAG GACGTCGCCT ACCTGTCGCG GGTCTGGAAC GTGGTCGAGC GTCGTGGCCG TGAAGCGGCC TCGTGCAGCA ACATCTATGA AGACCTGAGC CTGCCGCTGC GTTCGGTGCG CGACCTGATC CGCAAGGATG TGGACAAGGT GAAGGTGGAC TCCAAGGAGA CCTTCGCCCA GCTGCAGGCC TTCGTGGCCA AGTACATGCC GGTGCTGGCC GAGAAGATCG AGCTGTACAG CGGCGATCGC CCGATCTTCG ACATGTTCGG GGTGGAGGAC GAGATCGGCC GCGCGCTGGA CAAGCAGGTG CCGTTGAAGT CCGGTGGCTA CCTGGTGATC GACCAGACCG AGGCGATGAC CACCATCGAC GTCAACACCG GCTCGTTCCT TGGCCAGCGC AACCTGGAAG AGACGGTGTT CCGTACCAAC CTGGAGGCTG CGCAGGCAGT AGCCAGGCAG CTGCGGCTGC GCAACCTCGG CGGCATCATC ATCATCGACT TCATCGACAT GGACGATGCC GAGCACCGCC GCCAGGTGCT GCGCACGCTG GAAAAGGCGC TGGCGCGCGA TCATGCCAAG ACCACGGTGT ACGACTTCTC GCCGCTGGGT CTGGTGGAGA TGACCCGCAA GCGCACGGTG GAAAGCCTGG AGCGCCAGCT GTCGGAAACC TGCCCGCAGT GCAGTGGCCG CGGCACCATC AAGACCACCG AAACGGTGAC CTATGAGATC TTCCGCGAGA TCACCCGTGC GGTGCGCCAG TTCGATGCCG CGCGCCTGTT GGTGATTGCC TCGACCAAGG TGGTCGCGCG CATCACCGAC GAGGAGTCTT CGGCGGTGGC CGAGCTTGAG GAGTTCCTCG GCAAGAGCAT CCGCTTCCAG GCGGACGAGC AGTACCTGCA GGAGCAGTTC GATGTTGTGC TGCTCTGA
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Protein sequence | MSEEILVNVT PRETRVAVIE NGMLQELHIE RGWRRGVVGN IYKGKVQRVM PGMQAAFVEV GLERAAFLHA NDVVRPAPVA SADTENTTLP PPSSVPIVEL LRDGQDIVVQ VVKDPIGTKG ARLTTQISIP SRYMVLLPQS KVVGVSARIE DEGERARLKA LVTELSAQHG GYGYIVRTNA EGQPAEAIAE DVAYLSRVWN VVERRGREAA SCSNIYEDLS LPLRSVRDLI RKDVDKVKVD SKETFAQLQA FVAKYMPVLA EKIELYSGDR PIFDMFGVED EIGRALDKQV PLKSGGYLVI DQTEAMTTID VNTGSFLGQR NLEETVFRTN LEAAQAVARQ LRLRNLGGII IIDFIDMDDA EHRRQVLRTL EKALARDHAK TTVYDFSPLG LVEMTRKRTV ESLERQLSET CPQCSGRGTI KTTETVTYEI FREITRAVRQ FDAARLLVIA STKVVARITD EESSAVAELE EFLGKSIRFQ ADEQYLQEQF DVVLL
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