| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2889 |
|---|
| Symbol | |
|---|
| ID | 6477388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3220353 |
|---|
| End bp | 3221687 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642732083 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_002029271 |
|---|
| Protein GI | 194366661 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.568975 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTGG TCTCTGCCTG GCTGCGGATT CCATTCTGGC AGCGCGTGGT CGGTGGCTTC
GTGCTTGGCG CGCTGGCCGG CTGGGCGCTC GGCCCGGCTG CTGAAACCTG GTTCGGCCCG
CTGGGCGAGC TGTACGTCAC CCTGATCAAG ATGATCGCGG TGCCGCTGGT GTTCTTCGCG
GTCATCAACG CGATCTCGTC GCTGCACGGC CAGAAGTCGG TCGCCGCACT CAGTGGCCGC
ACCTTCCTGT GGTTCGTGAT CACCGCCGCG CTGGCGGTCT GCGTCGGCCT GGGCGTGGGT
ACCGTGCTGC AGCCCGGCGC CGGTGGCCTG CAGCTGTCGA TGGCCAGCAA CTACGTGCCG
CGCGAAGTGC CCAGCGTGGT GCAGGTACTG CTGGACGTGG TGCCGGCCAA TGTCTTCTAT
GCGCTGTCCG GCATCGGCAC CAAGGTCAAT GCGGCCGGTG AGACCGTGCT GGCTGCCGGT
CGCGGCTCGA TCCTGCCGGT GATCTTCTTC GCGGGCCTGG TGGGCTTTGC GATCGTCAAG
CTGGGCGAGA AGGTGACCGA GGCGCGTAAG CTGGTCGGGC AGATGAGCGA CATCATGATC
CAGGTGACGC GCTTCGTGCT GGAAGTCACC CCGATCGGTA CCTTCGGCCT GATCGCCGGC
CTGGTCGGCA GCTATGGCTT CGAGAAGCTG CTGCCACTGG GTCATTTCGT GCTGGCGCTG
TACGTGGCCT GCGCGCTGCA CATCGTGGTG GTCTACAGCG CACTGCTGCT GGCGCACGGC
CTGAACCCGC TGAAGTTCTT CCGTGGGGCG GCGCCGGGCA TGCAGGTGGC CTTCGTCAGT
TCGTCCAGCT TCGCTGCGAT GCCAGTGGCG CTGCGTTCGA TCACCCACAA CCTGGGCGTG
AACAAGGACT ACGGTTCGTT CGCGGTACCG CTGGGAGCCA GCATCAAGAT GGATGGCTGC
GGCGCGATCT ACCCAGCGCT GTGCGCGGTG TTCATCGCGC AGTACAGCGG TGTGCCGCTG
ACCCCGGAAC AGTACGTGGT GGTGCTGATC GCCTCGGTGC TGGGCAGCTT CGGCACCGCC
GGTGTACCCG GCACGGCAGT GATCATGGCC ACGGTGGTGC TGAGCGCAGC CAACCTGCCG
CTGGAGACCA TCGGCTACCT GTATGCCATC GACCGCATCC TCGACATGAT GCGCACGATG
ACCAATGTGA CGGGCCAGAT GCTGGTGCCG GTGATCGTGG CCAAGGAAAC CGGGCTGCTC
GACCAGGCGG TGTATGACAA CCCGTCCAGC AATGTGGGTG TGGACGATCC TGATCCAACA
CCGCCACGCG CCTGA
|
|---|
| Protein sequence | MKLVSAWLRI PFWQRVVGGF VLGALAGWAL GPAAETWFGP LGELYVTLIK MIAVPLVFFA
VINAISSLHG QKSVAALSGR TFLWFVITAA LAVCVGLGVG TVLQPGAGGL QLSMASNYVP
REVPSVVQVL LDVVPANVFY ALSGIGTKVN AAGETVLAAG RGSILPVIFF AGLVGFAIVK
LGEKVTEARK LVGQMSDIMI QVTRFVLEVT PIGTFGLIAG LVGSYGFEKL LPLGHFVLAL
YVACALHIVV VYSALLLAHG LNPLKFFRGA APGMQVAFVS SSSFAAMPVA LRSITHNLGV
NKDYGSFAVP LGASIKMDGC GAIYPALCAV FIAQYSGVPL TPEQYVVVLI ASVLGSFGTA
GVPGTAVIMA TVVLSAANLP LETIGYLYAI DRILDMMRTM TNVTGQMLVP VIVAKETGLL
DQAVYDNPSS NVGVDDPDPT PPRA
|
|---|
| |