Gene Smal_2888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2888 
Symbol 
ID6477387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3219288 
End bp3219992 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content70% 
IMG OID642732082 
ProductNLP/P60 protein 
Protein accessionYP_002029270 
Protein GI194366660 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.215701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCCTGG CGCTGTGTCT GACCAGCCTT CCGGCCTGGT CGCAGACTGT TCCCTCCCGC 
TCCGATGTGA CCCCGGCCCC CGCGGCCGAG AGCACCGCCC GCCCGGCCGC CAAGGCCGAG
GCTGCCGCTC CTCAGCGCAG CCGCGTCGAT GCCGCCGCCA GTGCCACGCT GGCCGCCCTG
CTGCCGCACC TGGCCGCCAA TGACACCATT CCGCTGATGG ACCGTTCGGC CGTGGTGGCC
GGCGACCTCA GCCGCCTGCT CGCCAACTAC GACACCAGCA GCGCCGCCAA TGGCAGCGTT
GTCGGCACCG CCGCCGACAA CGGCAAGGTG CAGTCGCTGC TGCGCCGCGC GATGACCCTG
CTGGGCACCC CGTACCGTTG GGGTGGCAGC AACCCGGACA GCGGTTTCGA CTGCAGCGGT
CTGGTCGGCT ACGTGTTCCG CTCGGCCCTG GGCATCGAGC TGCCGCGCGT ATCGCGCGAG
ATGGCCCACG ATGACAACGC CGAACTGATC AACGACCGCA CCGCGCTGGC CGCTGGTGAC
CTGGTGTTCT TCGGCCGCAA GGGCCGCGTC GACCACGTCG GCATCTACGT CGGTGATGGC
CGCTTCCTGC ACGCCCCGAG CTCCGGCAAG GATGTGCGCG TGGATACCCT GCTCAGTGGC
TACTGGGGCA ACAAGTTCAT GCAGGCCCGC CGGGTCGATC TCTGA
 
Protein sequence
MGLALCLTSL PAWSQTVPSR SDVTPAPAAE STARPAAKAE AAAPQRSRVD AAASATLAAL 
LPHLAANDTI PLMDRSAVVA GDLSRLLANY DTSSAANGSV VGTAADNGKV QSLLRRAMTL
LGTPYRWGGS NPDSGFDCSG LVGYVFRSAL GIELPRVSRE MAHDDNAELI NDRTALAAGD
LVFFGRKGRV DHVGIYVGDG RFLHAPSSGK DVRVDTLLSG YWGNKFMQAR RVDL