Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2887 |
Symbol | |
ID | 6477386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3218549 |
End bp | 3219088 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642732081 |
Product | NLP/P60 protein |
Protein accession | YP_002029269 |
Protein GI | 194366659 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.171139 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATCA CGCCAGTTTC GTCCGGCCCG CGCCGGCTCC TCGCCCCGGC CCTGCTGCTG GCCCTGCCCC TGTTGATGAC CGCTTGTGGC GGCGGCAAGG CCACGCGCCC GGCCCCACCA CCGCCCTCGG CGAACTGGCC GAAGACGGTG CCGGACAATC CCGAGGCCGC CAACTCGGTG CTGATGCGCG CCATCAGCCT GGTCGGCACG CCTTACCGCT ATGGCGGCAA CACGCCTGAT TCGGGCTTCG ACTGCAGCGG ACTGGTCGCC TACGTCTATC GCGAGATGCT GGACCTGAAG CTGCCGCGGA CCTCGCGCGA CCTGGCCGCG GTACAGGGCC CGAAGATCGA TCCGCAGCGC CTGGCCACGG GTGACCTGGT GTTCTTCGGC AGCCGCGGCA GCGTCACCCA TGTCGGCATT TATGTAGGTG AAGGACGCTT CGTGCACGCA CCGAGCACCG GCGGTACGGT TCGTCTCGAT TCGCTCAGCG GGCCCTACTG GAAAGACCAC TACACCGGCG CGAAACGTGT TCTTCGCTAA
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Protein sequence | MQITPVSSGP RRLLAPALLL ALPLLMTACG GGKATRPAPP PPSANWPKTV PDNPEAANSV LMRAISLVGT PYRYGGNTPD SGFDCSGLVA YVYREMLDLK LPRTSRDLAA VQGPKIDPQR LATGDLVFFG SRGSVTHVGI YVGEGRFVHA PSTGGTVRLD SLSGPYWKDH YTGAKRVLR
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