Gene Smal_2887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2887 
Symbol 
ID6477386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3218549 
End bp3219088 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content67% 
IMG OID642732081 
ProductNLP/P60 protein 
Protein accessionYP_002029269 
Protein GI194366659 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.171139 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATCA CGCCAGTTTC GTCCGGCCCG CGCCGGCTCC TCGCCCCGGC CCTGCTGCTG 
GCCCTGCCCC TGTTGATGAC CGCTTGTGGC GGCGGCAAGG CCACGCGCCC GGCCCCACCA
CCGCCCTCGG CGAACTGGCC GAAGACGGTG CCGGACAATC CCGAGGCCGC CAACTCGGTG
CTGATGCGCG CCATCAGCCT GGTCGGCACG CCTTACCGCT ATGGCGGCAA CACGCCTGAT
TCGGGCTTCG ACTGCAGCGG ACTGGTCGCC TACGTCTATC GCGAGATGCT GGACCTGAAG
CTGCCGCGGA CCTCGCGCGA CCTGGCCGCG GTACAGGGCC CGAAGATCGA TCCGCAGCGC
CTGGCCACGG GTGACCTGGT GTTCTTCGGC AGCCGCGGCA GCGTCACCCA TGTCGGCATT
TATGTAGGTG AAGGACGCTT CGTGCACGCA CCGAGCACCG GCGGTACGGT TCGTCTCGAT
TCGCTCAGCG GGCCCTACTG GAAAGACCAC TACACCGGCG CGAAACGTGT TCTTCGCTAA
 
Protein sequence
MQITPVSSGP RRLLAPALLL ALPLLMTACG GGKATRPAPP PPSANWPKTV PDNPEAANSV 
LMRAISLVGT PYRYGGNTPD SGFDCSGLVA YVYREMLDLK LPRTSRDLAA VQGPKIDPQR
LATGDLVFFG SRGSVTHVGI YVGEGRFVHA PSTGGTVRLD SLSGPYWKDH YTGAKRVLR