| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2878 |
|---|
| Symbol | |
|---|
| ID | 6477377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 3209818 |
|---|
| End bp | 3211401 |
|---|
| Gene Length | 1584 bp |
|---|
| Protein Length | 527 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642732073 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_002029261 |
|---|
| Protein GI | 194366651 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.700832 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTGGG ATGCGATCGT CGTTGGTGGT GGCCACAACG GCCTGGTCTG CGCGGCCTAT
CTGGCGCGCG GCGGAAAGAA GGTGCTGGTG CTGGAACGTC GTGGCGTTCT CGGCGGCGCG
GCAGTCACCG AGGAATTCCA TCCAGGCTTC CGCAATTCGG TGGCGTCATA CACGGTCTCG
CTGCTGCAGC CGCAGGTGAT CGATGACCTG CAGCTGCATG TACATGGGCT GCGCATCGTC
GCGCGTCCCG CCAACAACTT CCTGCCGTTG CCTGATGACC GCTACCTGCT GTCGGCACCA
GGCCGCACCC AGGCCGAAGT AGCGAAGTTC TCCGAACGGG ATGCGCAGCG CTTGCCAGCG
TACGATGCGC GCCTGGAGGT CTTCGCCGAC GTACTGCGCG CATGGGCTCT GCGTGCGCCA
CCCGACCTGG GTGTGGCGGG CGGTTGGCGT GCCCTGCCCG CCCTGTGGCA GATGGGCCGC
CTCGGTCGTG AACTGGCAAC GCTGGATGCC TCGCTGCGGC AGGAACTGCT GGACCTGTTC
ACGCTCTCGG CCGCGGAGTA CCTGGATCGC TGGTTCGAGA GCGAGCCGAT CAAGGCGTTG
TTCGGTTTCG ATGGCATCGT CGGCAACTAC GCCAGTCCAT ACACGCCCGG CAGCGCCTAC
GTGCTGCTGC ACCACGTGTT CGGCCAGTGC AATGGCGTGA AGGGTGCCTG GGGCCACGCG
ATCGGCGGCA TGGGCGCGAT CAGCCAGGCG ATTGCGGCCT CGGCACGCGA GGCCGGTGCG
CAGCTTCGCG TGGATGCAGG TGTGCGGCGC GTGCTGGTCG AACAAGGCCG CGCGGTGGGC
GTGGAATTGA GCAACGGCGA AACCCTGCGT GCGCGCGTGG TGATCGCCAA CGTCAATCCG
AAGCTGCTGT ACGAGCAGCT TCTGGAGCCG GCGCAGGTAC CGGCAGCTAC GCGCGAGCGG
ATGGAGAACT GGCGCTGCGG TTCGGGCACC TTCCGGATGA ACGTGGCGCT GTCGCGGTTG
CCGGACTTCC GTGCCCTGCC CGGCCCGGGC GAGCATCTCA GTGCGGGCAT CATCATGGCA
CCGAGTCTGG ATTACATGGA CCGCGCGTGG CTGGACGCGC GCCGCGAGGG CTGGTCGCGC
GAGCCGATCG TGGAGATGTT GATTCCGAGC ACGCTGGACG ATTCGCTGGC GCCGCCCGGG
CAGCATGTGG CCAGCCTGTT CTGCCAGCAC GTGGCGCCGG TGTTGCCCGA CGGGCGTCAC
TGGGATGATC ACCGCGAGAC TGTGGCCGAC CTGATGATCG CCACCGTCGA ACGGTATGCG
CCCGGCTTCG CTGACAGCGT GCTCGGTCGA CAGGTACTGT CACCGCTGGA TCTGGAACGC
ACCTTCGGCC TGATCGGCGG CGACATTTTC CACGGCGCGC TCAGTGCCAA CCAACTGTTC
TCGGCACGGC CGATGGTCGG CCAGGCCGGT TATCGCGGTG CCCTGCCGGG GTTGTATCTG
TGCGGCTCGG GAACCCATCC CGGCGGGGGT GTTACCGGCG CACCGGGGCA CAATGCCGCG
CAGGTGGTAT TGCAGGACCT GTAG
|
|---|
| Protein sequence | MTWDAIVVGG GHNGLVCAAY LARGGKKVLV LERRGVLGGA AVTEEFHPGF RNSVASYTVS
LLQPQVIDDL QLHVHGLRIV ARPANNFLPL PDDRYLLSAP GRTQAEVAKF SERDAQRLPA
YDARLEVFAD VLRAWALRAP PDLGVAGGWR ALPALWQMGR LGRELATLDA SLRQELLDLF
TLSAAEYLDR WFESEPIKAL FGFDGIVGNY ASPYTPGSAY VLLHHVFGQC NGVKGAWGHA
IGGMGAISQA IAASAREAGA QLRVDAGVRR VLVEQGRAVG VELSNGETLR ARVVIANVNP
KLLYEQLLEP AQVPAATRER MENWRCGSGT FRMNVALSRL PDFRALPGPG EHLSAGIIMA
PSLDYMDRAW LDARREGWSR EPIVEMLIPS TLDDSLAPPG QHVASLFCQH VAPVLPDGRH
WDDHRETVAD LMIATVERYA PGFADSVLGR QVLSPLDLER TFGLIGGDIF HGALSANQLF
SARPMVGQAG YRGALPGLYL CGSGTHPGGG VTGAPGHNAA QVVLQDL
|
|---|
| |