| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2859 |
|---|
| Symbol | psd |
|---|
| ID | 6477358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 3182275 |
|---|
| End bp | 3183117 |
|---|
| Gene Length | 843 bp |
|---|
| Protein Length | 280 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642732054 |
|---|
| Product | phosphatidylserine decarboxylase |
|---|
| Protein accession | YP_002029242 |
|---|
| Protein GI | 194366632 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0688] Phosphatidylserine decarboxylase |
|---|
| TIGRFAM ID | [TIGR00163] phosphatidylserine decarboxylase precursor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCA CCACCGCCCT GACGTACGCC CTGCCCCACC GCCTGCTGTC CTCGATGGCG
CGTTCGCTGG CGTACTCGGA CGATCCGCGC GTGTCGCGCT GGCTGATCGA CACGGTCACC
CGCAAGTTCA ACGTCAACCT GGACGAAGCG GCCAACCCGG ACCCGCGCAG CTATGCGACC
TTCAACCAGT TCTTCACCCG TGCGCTGAAG CCGGGCGCGC GCGTGGCCGA TGCCGATCCG
CGCAGCCTGG TGATGCCGGC CGACGGCCGC ATCAGCCAGC TTGGCAGGAT CGAGGCAGGC
CGCATCTTCC AGGCCAAGGG CCAGTCGTTC ACCGCCGCCG AACTGCTTGG CAGTGACGAG
GATGCCAAGC CGTACAACGA CGGCCTGTAC GCCACCGTGT ACCTGTCGCC GCGCGATTAC
CATCGCGTGC ACATGCCGTG GACCGGCACC CTGCGCGAAA CCGTGCACGT GCCCGGCCGC
CTGTTCAGCG TCGGCCCGGC CGCCGTCAAC GGCGTGCCGC GCCTGTTCGC GCGCAACGAA
CGCCTGGTCT GCCATTTCGA CACCAGCTTC GGCCCGATGG TCAGCGTGAT GGTCGGTGCG
CTGCTGGTGT CCGGCGTGGA AACCGTGTGG AGCGGCGAAG AAATTCCGGC CTACGGTGAC
CGCATCACCC GCAAGGATTA CCGCGGCCAG GGCATCCAGC TGGAGCGCTT CGCCGAGATG
GCGCGCTTCA ACTACGGTTC GACCGTGATC GTGCTGCTGC CGCCGGGCGT GGCCGAATTC
GCCCCGCAGC TGGGTGCCGA AAGCCCGGTG CAGCTGGGCC AGGCCCTGGC GAAACTGCGC
TGA
|
|---|
| Protein sequence | MSLTTALTYA LPHRLLSSMA RSLAYSDDPR VSRWLIDTVT RKFNVNLDEA ANPDPRSYAT
FNQFFTRALK PGARVADADP RSLVMPADGR ISQLGRIEAG RIFQAKGQSF TAAELLGSDE
DAKPYNDGLY ATVYLSPRDY HRVHMPWTGT LRETVHVPGR LFSVGPAAVN GVPRLFARNE
RLVCHFDTSF GPMVSVMVGA LLVSGVETVW SGEEIPAYGD RITRKDYRGQ GIQLERFAEM
ARFNYGSTVI VLLPPGVAEF APQLGAESPV QLGQALAKLR
|
|---|
| |