| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2851 |
|---|
| Symbol | truA |
|---|
| ID | 6477350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3173921 |
|---|
| End bp | 3174691 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642732046 |
|---|
| Product | tRNA pseudouridine synthase A |
|---|
| Protein accession | YP_002029234 |
|---|
| Protein GI | 194366624 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0101] Pseudouridylate synthase |
|---|
| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTACG CGCTTGGCGT CGAGTACGAC GGCAGCGATT TCAGGGGCTG GCAGAACCTG
GGCGAGGGTG GTCCCAGCGT GCAGGCCAGT CTTGAACAGG CCCTGTCGTC GGTGGCGGAC
ACGCCGCTGC AGGTGGTCTG TGCCGGTCGT ACCGATGCCG GTGTGCACGG CCAATGCCAG
GTCGTGCATT TCGATACCGA CGTGGTGCGC GATCCGCGCG CCTGGATGCT GGGCACCACC
ACCCGTCTGC CGCGTTCGAT CGCGGTGCGC TGGTGCGTTC CGGTCGCTGA CGATTTCCAT
GCCCGCTTCT CGGCGCGCGC GCGCCGCTAC CGCTACCGAC TGCTCAACCG CGAGGTGCGG
CCGGCGCTGG AGCGGCAGAC CCTGAGCTGG GAGCGGCGTG CGCTGGACGA AACACGCATG
CACATCGCCG GGCAGGCCCT GCTCGGCGAG AACGACTTCA ATGCATTCCG CTCCGTGCAG
TGCCAGGCGC TGCATGCACG GCGTGAACTG CAGTCGCTGC AGGTCAGCCG CCACGGCGAG
GTGATCGAGG TCTCAGTACA GGGCAATGCA TTCCTTCATC ACATGGTCCG CAATATTGTC
GGTTCGTTGA TCCTGGTGGG CAGCGGCGAG AAACCGGTGG AATGGATCGC TGAACTGCTG
GCCGGGCGCG ACCGCACCGT AGCCGGTCCC ACCGCACCGC CGCAGGGCCT GGTGTTCCTT
GGGCCCCTGT ACCCCGACAA CTGGCATCTG CCCGCCGAGG TCACGCTATG A
|
|---|
| Protein sequence | MRYALGVEYD GSDFRGWQNL GEGGPSVQAS LEQALSSVAD TPLQVVCAGR TDAGVHGQCQ
VVHFDTDVVR DPRAWMLGTT TRLPRSIAVR WCVPVADDFH ARFSARARRY RYRLLNREVR
PALERQTLSW ERRALDETRM HIAGQALLGE NDFNAFRSVQ CQALHARREL QSLQVSRHGE
VIEVSVQGNA FLHHMVRNIV GSLILVGSGE KPVEWIAELL AGRDRTVAGP TAPPQGLVFL
GPLYPDNWHL PAEVTL
|
|---|
| |