| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2829 |
|---|
| Symbol | |
|---|
| ID | 6477327 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3146496 |
|---|
| End bp | 3147245 |
|---|
| Gene Length | 750 bp |
|---|
| Protein Length | 249 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642732023 |
|---|
| Product | NADH dehydrogenase subunit C |
|---|
| Protein accession | YP_002029212 |
|---|
| Protein GI | 194366602 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.448263 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAGC AAGCATCCTT CATCGACCGA CTCTCCGCAC GTTTCGCAGG TGCGAAGGTC
ATCGTGGTCG AACCCCGCGG CGAAGTGACG CTGGAAGTGC CTGCCGCCGA GTGGCACGCC
ACCGCCCTGG CGCTGCGTGA CGAGTTTGGT TTCGAACAGG CCGTGGATCT CTGCGGCGTC
GACTATCTCG GTTATGGCTC CGACGAGTGG GACACCGCCG ATGTGTCCTC GCAGGGCTTC
AGCCGTGGTG TCGAAGGCAA GGCCCAGGGC CGTTTCGCGT GGGGCGAGTT CCCCACCGAG
GAAAACGGTG CCGACGGCGC CCGCCCGCAG CACATGCCGA CCCAGCGGTT CGCCGTGGTC
GCCCAGCTGC GTTCGTACCA GCACAACCTG ATGATGCACC TGCGCTGCTT CGCTCCTGAC
GAAGCGCTGC CGGTGGTGTC CTCGCTGACC GGCATCTGGC CGGGCCTGAA CTGGTTCGAG
CGCGAAGCGT TCGACCTGTA CGGCGTGATC TTCGAAGGCC ACCCGGACCT GCGCCGGATC
CTGACCGACT ACGGTTTCGT CGGTCATCCG TTCCGCAAGG ACTTCCCGCT GATCGGCAAT
GTCGAAGTCC GCTACGACGA AGAAAAGAAG CGCGTGATCT ACGAACCGGT CACCTCGGTG
GAGCCGCGTG TCGGCGTGCC GCGCGTGATC CGCGACGACG CCCGCCTGCA GACCGCAGAA
GGTGAGCGCG CGCAGGAGGC AGTGAAGTGA
|
|---|
| Protein sequence | MAEQASFIDR LSARFAGAKV IVVEPRGEVT LEVPAAEWHA TALALRDEFG FEQAVDLCGV
DYLGYGSDEW DTADVSSQGF SRGVEGKAQG RFAWGEFPTE ENGADGARPQ HMPTQRFAVV
AQLRSYQHNL MMHLRCFAPD EALPVVSSLT GIWPGLNWFE REAFDLYGVI FEGHPDLRRI
LTDYGFVGHP FRKDFPLIGN VEVRYDEEKK RVIYEPVTSV EPRVGVPRVI RDDARLQTAE
GERAQEAVK
|
|---|
| |