| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2827 |
|---|
| Symbol | |
|---|
| ID | 6477325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3144567 |
|---|
| End bp | 3145094 |
|---|
| Gene Length | 528 bp |
|---|
| Protein Length | 175 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642732021 |
|---|
| Product | NADH dehydrogenase subunit E |
|---|
| Protein accession | YP_002029210 |
|---|
| Protein GI | 194366600 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | [TIGR01958] NADH-quinone oxidoreductase, E subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.169197 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGA CAGGTAATTT CGAGGCGGCG CGCGACGTCG ACCCGATGGT GGTGCTGAGC
GACAAGACGC GCGCTCACAT CGATCACTGG CTGTCCAAGT TCCCGCCGGA CCGCAAGCGC
TCTGCCGTGC TGCAGGGCCT GCACGCGGCC CAGGAGCAGA ACGAGGGCTG GTTGACCGAC
GAGCTGATCG CCGGCGTGGC CAAGTATCTC GACCTGCCGC CGGTGTGGGC CTACGAGGTC
GCCAGCTTCT ACTCGATGTT CGAGACCGAG AAGGTGGGCC GCAACAACGT GGCCATCTGC
ACCAACATCA GCTGCTGGCT CAATGGCGCC GAGGACATCG TCCGCCATTG CGAGAAGAAG
CTGGGCATCA AGCACGGTGA ATCGACCGCG GACGGCCGCG TCTACCTCAA GCGCGAGGAA
GAGTGCCTCG CTGGCTGCGG TGGCGCACCG ATGATGGTCA TCAACGGTCA CTACCATGAG
CGTCTGACCC TGGAAAAGGT CGACGAGCTG CTGGACGGGC TGGAGTAA
|
|---|
| Protein sequence | MKATGNFEAA RDVDPMVVLS DKTRAHIDHW LSKFPPDRKR SAVLQGLHAA QEQNEGWLTD
ELIAGVAKYL DLPPVWAYEV ASFYSMFETE KVGRNNVAIC TNISCWLNGA EDIVRHCEKK
LGIKHGESTA DGRVYLKREE ECLAGCGGAP MMVINGHYHE RLTLEKVDEL LDGLE
|
|---|
| |