| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2826 |
|---|
| Symbol | |
|---|
| ID | 6477324 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3143222 |
|---|
| End bp | 3144562 |
|---|
| Gene Length | 1341 bp |
|---|
| Protein Length | 446 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642732020 |
|---|
| Product | NADH-quinone oxidoreductase, F subunit |
|---|
| Protein accession | YP_002029209 |
|---|
| Protein GI | 194366599 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit |
|---|
| TIGRFAM ID | [TIGR01959] NADH-quinone oxidoreductase, F subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0359658 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATC ACCACGAATC CAAGGGTCCG GTCGGCCCCG CGCCGCTGCC GCACCAGGTG
GTCTACACCA CCCTGCATTA CGACACCCCG TGGTCGTACG AAAGCTACCT GAAGACTGGT
GGCTATGCCG CCCTGCGCAA GATCCTCGAA GAGAAGATCC CGCCGGAGCA GGTCATCGAG
ATGGTCAAGG CCTCGGGCCT GCGCGGCCGC GGTGGCGCAG GCTTCCCGAC CGGCCTGAAG
TGGTCCTTCA TGCCCAAGGG CAACATGCAG AAGTACATCC TCTGCAACTC GGATGAATCC
GAGCCGGGCA CCTGCAAGGA CCGCGACATC CTGCGCTACA ACCCGCATTC GGTGGTGGAA
GGCATGGCGA TCGCCTGCTA CGCCACCGGT TCGACCGTGG GTTACAACTA CCTGCGCGGT
GAGTTCCACC ACGAGCCGTT CGAGCACTTC GAGCAGGCCC TGGCCGACGC CTATGCAAAT
GGCTGGCTGG GCAAGAACGT GATGGGCTCG GGCGTGGACA TCGACATCTA CGGTGCGCTG
GGCGCCGGCG CGTACATCTG CGGCGAAGAA ACCGCGCTGA TGGAATCGCT GGAAGGCAAG
AAGGGCCAGC CGCGCTACAA GCCGCCGTTC CCGGCCAACT TCGGCCTGTA CGGCAAGCCG
TCGACGATCA ACAACACCGA AACCTATGGT TCGGTGCCGG CGATCATCCG CAACGGTCCG
GAGTGGTTCA AGGGCCTGAG CCTGACCGCC AACGGCGGTC CGAAGTGCTT CTCGGTATCC
GGCTGCGTGC AGAACGGCGG CAACTTCGAA GTGCCGCTGG GCACCACGTT CCACGATCTG
CTGCAGATGG CCGGTGGCCT GCGTCCGGGC CGCACCCTGA AGGGCGCGAT TCCGGGCGGC
GTGTCGATGC CGGTGCTGAC CGCGGCCGAG CTGAAGGACC TGCCGATGGA CTACGACACC
ATCCGTGCGC TGGGCTCCGG CCTGGGTTCG GGTGCGATCG TGGTGCTTGA CGACAGCGTC
TGCTGCGTCA AGTTCGCCTG CCGCATCAGC CAGTTCTTCC ACAAGGAATC CTGTGGCCAG
TGCACCCCGT GCCGTGAAGG TACCGGCTGG ATGCACCGCG TGCTGGAGCG CATCGTCGCC
GGCAAGGCCA CGATGGAAGA CCTGCACCAG CTGAAGGCGG TGGCCGGCCA GATCGAAGGC
CACACCATCT GTGCGTTCGG TGAAGCGGCT GCATGGCCCA TCCAGGGCTT CCTGCGCCAG
TTCTGGGACG AATTCGAGTA CTACATCGTC AACGGTCATT CGATGGTTGA CGGCAAGAAG
GTGGAGGCAG CCGCCGCATG A
|
|---|
| Protein sequence | MAHHHESKGP VGPAPLPHQV VYTTLHYDTP WSYESYLKTG GYAALRKILE EKIPPEQVIE
MVKASGLRGR GGAGFPTGLK WSFMPKGNMQ KYILCNSDES EPGTCKDRDI LRYNPHSVVE
GMAIACYATG STVGYNYLRG EFHHEPFEHF EQALADAYAN GWLGKNVMGS GVDIDIYGAL
GAGAYICGEE TALMESLEGK KGQPRYKPPF PANFGLYGKP STINNTETYG SVPAIIRNGP
EWFKGLSLTA NGGPKCFSVS GCVQNGGNFE VPLGTTFHDL LQMAGGLRPG RTLKGAIPGG
VSMPVLTAAE LKDLPMDYDT IRALGSGLGS GAIVVLDDSV CCVKFACRIS QFFHKESCGQ
CTPCREGTGW MHRVLERIVA GKATMEDLHQ LKAVAGQIEG HTICAFGEAA AWPIQGFLRQ
FWDEFEYYIV NGHSMVDGKK VEAAAA
|
|---|
| |