| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2811 |
|---|
| Symbol | |
|---|
| ID | 6477307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 3123378 |
|---|
| End bp | 3125486 |
|---|
| Gene Length | 2109 bp |
|---|
| Protein Length | 702 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642732003 |
|---|
| Product | polynucleotide phosphorylase/polyadenylase |
|---|
| Protein accession | YP_002029194 |
|---|
| Protein GI | 194366584 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
|---|
| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.212974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAAAAA TCACCAAAAC CTTCCAGTAC GGCAAGCACA CCGTCACGCT TGAGACTGGC
GAAATCGCCC GCCAGGCCGG TGGCGCCGTC ATCGTCAAGT TCGACGACAC CGTGCTGCTG
GTCTCCGCCG TTGCCGCCAA GAGCGCGCGT GAGGGCCAGG ACTTCTTCCC GCTGACCTGC
GACTATCAGG AGAAGTTCTA CGCCGGTGGC CGCATCCCGG GTGGCTTCTT CAAGCGCGAA
GGCCGCGCGA CCGAGAAGGA AACCCTGATC TCGCGCCTGA TCGATCGTCC GATCCGTCCG
CTGTTCCCGG AAGACTACAA GAACGAAGTC CAGATCATCG CCACGGTGAT GTCGCTGAAC
CCGGAGATCG ACGGTGACAT CCCGGCGCTG ATCGGTGCTT CGGCCGCGCT GTCGCTGGCC
GGTACCCCGT TCAAGGGCCC GATCGCTGCC GCCAAGGTCG GTTACAAGGA CGGTGAGTAC
ATCCTCAACC CGACCGTATC CGAGCTGAAG GAATCGCAGC TGGAGCTGGT CGTTGCCGGT
ACCGCCAACG CCGTGCTGAT GGTGGAATCC GAAGCCGCGC TGCTGTCCGA AGACGTGATG
CTGGGCGCCG TGACCTTCGG TCACCGCGAA ATGCAGAAGG TCATCAACGC CATCAACGAG
CTGACCGTCG AAGCCGGCAC CAAGCCGTCG ACCTGGGAAG CCCCGGCCAA GAACACCGCG
CTGATCAGCG CCGTGCAGGA AGCGGTCGGC CCGCGCCTGG GCGAAGCCTT CCAGGTGCGT
GACAAGCTGC AGCGCCGTGA CGCCATCTCG GCGATCAAGA AGGACGTGGT CGAGTCGCTG
GCCGGCCGCG TTGCCGCCGA AGGCTGGAAC CCGGCCGAAC TGTCGAAGGA ATTCGGCGAG
CTGGAATACA GCACCATGCG CAACTCGGTG CTGGACACCA AGGTCCGCAT CGACGGCCGT
GCGCTGGACA CCGTCCGCCC GATTGCGGTG AAGACCAGCG TGCTGCCGCG TACCCACGGT
TCCTCGCTGT TCACCCGTGG CGAGACCCAG GCCATCGTGA CCATCACCCT GGGCACCGCC
CGTGATGGCC AGGTCATCGA TGCCGTCTCC GGTGAGTACA AGGAAAACTT CCTGTTCCAC
TACAACTTCC CCCCCTACTC GGTGGGTGAG ACCGGCCGCA TGATGGGCCC GAAGCGTCGC
GAAATCGGTC ACGGCCGTCT GGCCAAGCGC GGCGTGCTGG CAGTGATGCC GTCGCTGGAG
TCGTTCCCGT ACACCATCCG CGTTGTCTCG GAAATCACCG AGTCGAACGG TTCCTCGTCG
ATGGCCTCGG TCTGCGGTTC GTCGCTGGCC CTGATGGACG CCGGCGTGCC GGTGAAGGCA
CCGGTTGCCG GTATCGCCAT GGGCCTGGTC AAGGAAGGCG ATCGCTTCGT CGTCCTGTCC
GACATCCTGG GTGACGAAGA TCACCTGGGC GACATGGACT TCAAGGTGGC CGGTACCGCT
GAGGGCATCT CCGCCCTGCA GATGGACATC AAGATCGAAG GCATCACCGA AGAGATCATG
AAGCAGGCTC TGCAGCAGGC CAAGGCTGGC CGTCTGCACA TCCTGGGCGA AATGGCCCAC
GGCCTGACCG CTCCGCGCGA AGAGCTGTCG GACTACGCGC CGCGTCTGCT GACCATCAAG
ATCCACCCGG ACAAGATCCG CGAAGTGATC GGCAAGGGTG GTTCGACCAT CCAGGCCATC
ACCAAGGAAA CCGGCACCCA GATCGACATC CAGGATGACG GCACCATCGT CATCGCTTCG
GTCAATGCCA TCGCTGCGCA GGCCGCCAAG GCCCGCATCG AGCAGATCAC CTCGGACGTC
GAGCCGGGCC GCATCTACGA AGGCAAGGTC GCCAAGATCA TGGACTTCGG TGCGTTCGTC
ACCATCCTGC CGGGCAAGGA TGGCCTGGTG CACGTGTCGC AGATCTCCAG CGACCGCGTC
GAGAAGGTCG GCGACGTGCT GAAGGAAGGC GATGTGGTCA AGGTCAAGGT GCTGGAAGTC
GACAAGCAGG GCCGTATCCG CCTGTCGATG AAGGCCGTTG AAGAAGGCGA AGGCGCCAGC
GCCGAATAA
|
|---|
| Protein sequence | MAKITKTFQY GKHTVTLETG EIARQAGGAV IVKFDDTVLL VSAVAAKSAR EGQDFFPLTC
DYQEKFYAGG RIPGGFFKRE GRATEKETLI SRLIDRPIRP LFPEDYKNEV QIIATVMSLN
PEIDGDIPAL IGASAALSLA GTPFKGPIAA AKVGYKDGEY ILNPTVSELK ESQLELVVAG
TANAVLMVES EAALLSEDVM LGAVTFGHRE MQKVINAINE LTVEAGTKPS TWEAPAKNTA
LISAVQEAVG PRLGEAFQVR DKLQRRDAIS AIKKDVVESL AGRVAAEGWN PAELSKEFGE
LEYSTMRNSV LDTKVRIDGR ALDTVRPIAV KTSVLPRTHG SSLFTRGETQ AIVTITLGTA
RDGQVIDAVS GEYKENFLFH YNFPPYSVGE TGRMMGPKRR EIGHGRLAKR GVLAVMPSLE
SFPYTIRVVS EITESNGSSS MASVCGSSLA LMDAGVPVKA PVAGIAMGLV KEGDRFVVLS
DILGDEDHLG DMDFKVAGTA EGISALQMDI KIEGITEEIM KQALQQAKAG RLHILGEMAH
GLTAPREELS DYAPRLLTIK IHPDKIREVI GKGGSTIQAI TKETGTQIDI QDDGTIVIAS
VNAIAAQAAK ARIEQITSDV EPGRIYEGKV AKIMDFGAFV TILPGKDGLV HVSQISSDRV
EKVGDVLKEG DVVKVKVLEV DKQGRIRLSM KAVEEGEGAS AE
|
|---|
| |