Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2789 |
Symbol | |
ID | 6477284 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 3105527 |
End bp | 3106168 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642731980 |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_002029172 |
Protein GI | 194366562 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1280] Putative threonine efflux protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.376522 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCTGC ATACCTGGTG GTGGTTCCTC GCCACGGTGT TCGTTCTGTG TGGTACGCCG GGGCCGAACA TGCTGCATAT CCTCGGTCGC AGCGTCGGGC TCGGCTTTCG CGGCAGCGTG CCGGCGATGG CTGGCTGCCT GCTGGCGATG CTGCTGGTGC TGGCGGCCTC CGCAGCAGGC CTGAGTGCGC TGCTGCATTC CTCGCCGATG CTGTTTGAGG TGCTGCGCTA TCTTGGCGTG GCCTATCTGG CCTGGCTGGG TCTAAAGGCA TGGCGTGACA GTTGCCGGCC GGCACCACCG GTGACGGTCG ATGCCGCGCT GCCGATTGCG GCGTCGCTGG GCGCGTGGAG GGTGTTCCGT GGTGGCCTTC TGGTGGGCCT GAGCAATCCC AAGCTGCTGC TGTTCGCTGC GGCGTTCCTG CCGCAGTTCG TCGACCCGTC GCGTGGCCAG GCGCTGCAGT ACAGCGTGCT GGTTGCCACC TTCGCTGCCT GCGAGTTGTT CTGGTACGTG ATGTATGCCG CCGGTGGCCA TGGCCTGCGC CGTTGGTTGG CCAAACCTTT CGCGCGGCGC TGGTTCGAGC GGCTGGTGGG CAGCGTGTTC CTGGCCTTCG CGGTGGCCCT GCTGCGTTTC CGCCCGCGCT GA
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Protein sequence | MALHTWWWFL ATVFVLCGTP GPNMLHILGR SVGLGFRGSV PAMAGCLLAM LLVLAASAAG LSALLHSSPM LFEVLRYLGV AYLAWLGLKA WRDSCRPAPP VTVDAALPIA ASLGAWRVFR GGLLVGLSNP KLLLFAAAFL PQFVDPSRGQ ALQYSVLVAT FAACELFWYV MYAAGGHGLR RWLAKPFARR WFERLVGSVF LAFAVALLRF RPR
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