Gene Smal_2789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2789 
Symbol 
ID6477284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3105527 
End bp3106168 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content67% 
IMG OID642731980 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_002029172 
Protein GI194366562 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.376522 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCTGC ATACCTGGTG GTGGTTCCTC GCCACGGTGT TCGTTCTGTG TGGTACGCCG 
GGGCCGAACA TGCTGCATAT CCTCGGTCGC AGCGTCGGGC TCGGCTTTCG CGGCAGCGTG
CCGGCGATGG CTGGCTGCCT GCTGGCGATG CTGCTGGTGC TGGCGGCCTC CGCAGCAGGC
CTGAGTGCGC TGCTGCATTC CTCGCCGATG CTGTTTGAGG TGCTGCGCTA TCTTGGCGTG
GCCTATCTGG CCTGGCTGGG TCTAAAGGCA TGGCGTGACA GTTGCCGGCC GGCACCACCG
GTGACGGTCG ATGCCGCGCT GCCGATTGCG GCGTCGCTGG GCGCGTGGAG GGTGTTCCGT
GGTGGCCTTC TGGTGGGCCT GAGCAATCCC AAGCTGCTGC TGTTCGCTGC GGCGTTCCTG
CCGCAGTTCG TCGACCCGTC GCGTGGCCAG GCGCTGCAGT ACAGCGTGCT GGTTGCCACC
TTCGCTGCCT GCGAGTTGTT CTGGTACGTG ATGTATGCCG CCGGTGGCCA TGGCCTGCGC
CGTTGGTTGG CCAAACCTTT CGCGCGGCGC TGGTTCGAGC GGCTGGTGGG CAGCGTGTTC
CTGGCCTTCG CGGTGGCCCT GCTGCGTTTC CGCCCGCGCT GA
 
Protein sequence
MALHTWWWFL ATVFVLCGTP GPNMLHILGR SVGLGFRGSV PAMAGCLLAM LLVLAASAAG 
LSALLHSSPM LFEVLRYLGV AYLAWLGLKA WRDSCRPAPP VTVDAALPIA ASLGAWRVFR
GGLLVGLSNP KLLLFAAAFL PQFVDPSRGQ ALQYSVLVAT FAACELFWYV MYAAGGHGLR
RWLAKPFARR WFERLVGSVF LAFAVALLRF RPR