Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2762 |
Symbol | |
ID | 6477254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 3082468 |
End bp | 3083544 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642731950 |
Product | ribonuclease D |
Protein accession | YP_002029145 |
Protein GI | 194366535 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.713242 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCAACCT GGATCACCAC CCCCACCGAG CTGGATGCGT ACTTCCAGCA GCGCCCCTCC CGCATCGGCC TTGACACCGA ATTCATTCGT GAGCGCACCT TCTGGCCGCA GCTGGCACTG GTGCAGATGG CGGTCGGCCA GGACATCCTG CTGATCGACC CGCTGATTCC CGGCATGGCC GAGGCGCTGG CGCCGTGGCT GGCCGATGAA TCGATCATCA AGGTGATGCA CAGCGCCAGC GAAGACCTGG TCGCCTTCAA GTGGGCCTGC GGCGTGCTGC CACGACCGCT GTTCGACACC CAGATCGGCG CGTCACTGGC CGGCATCGGC GGCGGCATGG GCTACCAGAA GCTGGTGGCT GAGATCACCG GCGTGGCATT GGCCAAGGGC GAGACCCGCT CTGACTGGAT GCGCCGGCCG CTGTCGGAGT CGCAGCTGCA GTACGCCGCC GACGACGTCG AGCATCTGTT CGCGATGCAT GACGCCATCG ATGCCAAGCT GCAGGCGCTC GGCCGCCAGC AGTGGCTGCA TGACGACGGC GAGCGCCTGC TGGCCAGCGT CGCCAATGAC GAGGACCGCT GGCCGCACCT GTCGATGCGC TCGGCGCAGT TCCTTGATGC CGCCGCGCAG CGCCGCCTGC TGCGCCTGCT GCGCTGGCGC GATATGCAGG CACGCAGCAG CGACCGCCCG CGCAGCTGGA TCCTGGACAA CGAACTGGCG GCGACCCTGG CGCGTACGCC ACCGGCCGAC GCCGACGCCC TGGCCAAGCT GTTCGAGCAG TTCCCCAAGG CACCGCGCAA GCTCGCCGCT GCCGTGTGGC AGGCGCTGGA CACTCCGCTG GCCGACGAAG CCGAAGCGCC GCTGGCGCTG CCGGCCAACG ACAGCAACAA GCAGGCGCTG AAAAAGCTGC AGGATGCGGT GGCCGAACGC AGCCGCGAGC TGGGCCTGCC CGATGGCATC CTCGCCTCGC GCAAGCACCT CGAAAGCTAT CTGGAGCGTC GCCAATGGCC GGCCGCACTG GCCGGCTGGC GCCAGCAGGA ACTGGAATCG CGGCTGCAGG CACTGCTGCC CGCATAA
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Protein sequence | MATWITTPTE LDAYFQQRPS RIGLDTEFIR ERTFWPQLAL VQMAVGQDIL LIDPLIPGMA EALAPWLADE SIIKVMHSAS EDLVAFKWAC GVLPRPLFDT QIGASLAGIG GGMGYQKLVA EITGVALAKG ETRSDWMRRP LSESQLQYAA DDVEHLFAMH DAIDAKLQAL GRQQWLHDDG ERLLASVAND EDRWPHLSMR SAQFLDAAAQ RRLLRLLRWR DMQARSSDRP RSWILDNELA ATLARTPPAD ADALAKLFEQ FPKAPRKLAA AVWQALDTPL ADEAEAPLAL PANDSNKQAL KKLQDAVAER SRELGLPDGI LASRKHLESY LERRQWPAAL AGWRQQELES RLQALLPA
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