| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2744 |
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| Symbol | |
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| ID | 6477236 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 3060420 |
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| End bp | 3062546 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642731932 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002029127 |
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| Protein GI | 194366517 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0985963 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.64703 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTGGC TCGGCTCGGG AATGCAGGCC CGGTTCCTGC TCGCGATGGG CGGGGCGATG
ATCGTTGTCG TGGCGATCCT GGCGGTACTG CTTGGGCGGC AGACGGCAAT GCAGAGCGAG
GTGCGCAACC TCAGTGGCAG CGTCATCCAT GAATTGTTCG ACCGCGGCGT GCGCAGCCGT
GGCGAGGCGA TGGCGCGCGA GTTGTCCGAT GCGCTGGCCA ACCCGCTGTA CTACCGCGAC
CTGGACCAGG TCGGCGCGCT GGTGCGCAAT ACCGCCCGCC AGCAGGTGGT GCGCTACGTG
CTGGTGTTCG ATGACCATGG CCGGCTGGTG CATGACGGTA CGGTGGAAGT CGCGGGCTTC
GGGCAGCCCA TGGCCGACCC GCTGGCGCCC AGGGCTGTGG CCGCACGGGC ACTGGTGGTG
CAGGAATCGC CGAAGGTGCT CGACAACGCG ATGCCGATCA TGGTCGGCAA TCAGCGTATC
GGCGGCGTCC GCGTCGGTAT GGCGCTGGAC GAGGTACAGC AGCGCGAACA AGCTGCCAAC
GCCACCCTCG GAGAGCGCCT GCAGCAGGTT GGCAGCCGCC ACCTGGGCTG GCTGCTGCTG
ATGCTGGGCC TGCTGGTGGT GATCGGCGTG GTGGTGATCC TCTACGTGCA GCGCACGCTG
GTGGCGCCGA TCCGCGACCT GGCTGCGGCG GCACGCCGTA TCGAAGCCGG GGACTACCAG
GCACCGCTGG CCGAGAACAG TCGCGATGAC GAGGTCGGTG AGCTGGTGCG CGGCTTTGCC
AGCATGCGTG ATGCGATCGC CCGCCATGAT CGCGAAGTGC GGCGCATGGC CTATACCGAT
GCGTTGACCG GGCTGACCAA CCGGCTGGCG TTCCGCGAGG CGCTGGATCA CCGGTTGATG
GCCGCGCGCG CCTCCAACCA TCGGCTGGGC CTGCTGTTTG CCGACATCGA CGACTTCAAG
CGGGTCAACG ATACCCTTGG CCACGAGGCA GGCGACGAGG CGTTACTGCA GTTCGCACAG
CGCATCGGCC GCGCAGTGAC CGATGCCGGT GGCGATGAGG CGCTGCTGGC GCGGTTCGGT
GGCGACGAAT TCGTGATCCT GGTCGGCGAC GGTGACGTGG CTGCCAACGC GCGGTTGCTG
GCCGAAGTGC TGGTGCGCGA GCTGGGCAAG CCGCTGGTGG TGCAGGGCAG GGAGCTGTTC
CTCGGCACCT CGATCGGCGT GACCCTGTTC CCCGACGATG CGGCCGATGC GACCACGCTG
CTGAAGAACG GCGACATCGC CATGTACCAG GCGAAGATGG CCGGCAAGAA CTGCTATCGC
TACTACAGCC GCGCGATGGA CCATGCGGTC GAGCGCCGCG TGCACATGGA GCAGGAGCTG
CGCGGTGCCT GGGAGCGAGG CGAGCTGCGC CTGGCCTACC AGCCGATCTT CCGCATGCGC
GACCGCCGCA TGGTGGGTGT CGAAGTGCTG CTGCGCTGGC AGCACCCGAC CCTGGGCACG
ATCCCGCCGT CGGTGTTCAT CGAAGTGGCC GAGCAGAGCG GGTTGATCGA GATCATCGGC
CCGAAGGTGC TGCGCGCGGC CTGCATTGAA GCCTCGCAGT GGCCGCGCGG AGCGGCCGGT
GATGACCTGT TCGTATCGGT CAATGTATCG CCGCGGCAGC TGCGCGGCGG TGAGTTGCCG
GCACTGGTGG CGCAGTGCCT GCATGAGTCC GGGCTGCCGG CCTCGCGCCT GCACCTGGAG
CTGACCGAGA CGGCGGTGAT CGGCGACGAG ATGGTGGCCG CGCAGCTGCT GGACAAGCTG
CACCGCACCG GGGTGAAGGT CTGGCTGGAC GATTTCGGCA CCGGCTTCTC CGGCCTCAGC
CATCTGCGCC AGGTGCCGGT GGACGGGGTA AAGATCGACA AGAGTTTCGT CGCCGACATG
CAGCGCGACC CCGACGACCT GGCCCTGACC ACGGCGATCA TCGCCATGGC CCATGCGCTG
GGCATCACGG TGGTGGCCGA GGGCATCGAA CAGCAGGCGC AGTTCGAGCT GCTGGCCCAG
CGTGGCTGCG ACCTCGGCCA AGGCTACTGG CTGAGCCACC CGGTGACCGC CACCGAAGTG
GTGCGGATGA TTGAATCGGG CCTCTGA
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| Protein sequence | MKWLGSGMQA RFLLAMGGAM IVVVAILAVL LGRQTAMQSE VRNLSGSVIH ELFDRGVRSR
GEAMARELSD ALANPLYYRD LDQVGALVRN TARQQVVRYV LVFDDHGRLV HDGTVEVAGF
GQPMADPLAP RAVAARALVV QESPKVLDNA MPIMVGNQRI GGVRVGMALD EVQQREQAAN
ATLGERLQQV GSRHLGWLLL MLGLLVVIGV VVILYVQRTL VAPIRDLAAA ARRIEAGDYQ
APLAENSRDD EVGELVRGFA SMRDAIARHD REVRRMAYTD ALTGLTNRLA FREALDHRLM
AARASNHRLG LLFADIDDFK RVNDTLGHEA GDEALLQFAQ RIGRAVTDAG GDEALLARFG
GDEFVILVGD GDVAANARLL AEVLVRELGK PLVVQGRELF LGTSIGVTLF PDDAADATTL
LKNGDIAMYQ AKMAGKNCYR YYSRAMDHAV ERRVHMEQEL RGAWERGELR LAYQPIFRMR
DRRMVGVEVL LRWQHPTLGT IPPSVFIEVA EQSGLIEIIG PKVLRAACIE ASQWPRGAAG
DDLFVSVNVS PRQLRGGELP ALVAQCLHES GLPASRLHLE LTETAVIGDE MVAAQLLDKL
HRTGVKVWLD DFGTGFSGLS HLRQVPVDGV KIDKSFVADM QRDPDDLALT TAIIAMAHAL
GITVVAEGIE QQAQFELLAQ RGCDLGQGYW LSHPVTATEV VRMIESGL
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