Gene Smal_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2727 
Symbol 
ID6477219 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3042918 
End bp3044006 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content67% 
IMG OID642731915 
Productacetylornithine deacetylase 
Protein accessionYP_002029110 
Protein GI194366500 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGAAC AGACGCTCGA TCACCTGCAG GCGCTGGTGT CCTTCGACAC CCGCAACCCG 
CCGCGTGCGA TCACCACCGG TGGCATCTTC GATTACCTGC GCGACAACCT GCCCGGCTTC
AACGTCGAGG TGATCGACCA TGGCGCCGGT GCGGTCAGCC TGTATGCGGT GCGTGGCACG
CCGAAGTACC TGTTCAACGT GCACCTGGAT ACCGTGCCGG ACTCGCCGCA CTGGAGTGCC
GACCCGCATG TGATGCGGCG CCTCGACGAC CGCGTGGTAG GCCTTGGCGT ATGCGATATC
AAGGGCGCGG CCGCCGCGCT GGTGGCCGCG GCCAACGCCA GTGATGGCGA TGCCGCGTTC
CTGTTCTCCA GCGACGAGGA AGCCAACGAT CCGCGCTGCA TCGCCGCGTT TCTGGCCCGT
GGCATTCCGT ATGAAGCGGT GCTGGTGGCC GAGCCGACCA TGAGCGAGGC GGTGTTGGCG
CACCGAGGCA TCAGCTCGGT GCTGATGCAG TTCTCCGGTC GCGCCGGGCA TGCCTCGGGC
AAGCAGGATG CGGCCGCCAG CGCACTGCAT CAGGCCATGC GCTGGGGCAA CCGTGCGCTG
GACCATGTGG AATCGCTGGC CTCGGCGCGC TTCGGCGGCC TCACCGGCCT GCGTTTCAAC
ATCGGCCGCG TCGAAGGCGG GATCAAGGCC AACATGATTG CCCCGGCCGC CGAAGTGCGG
TTCGGCTTCC GCCCGCTGCC GTCGATGGAC ATTGATGGCC TGCTGGCAAC CTTTGCCGGT
TTCGCTGAGC CGGAAGCCGC ATTGTTCACT GAAACCTTCC GTGGTCCCAG CCTGCCGGCC
GGTGACATCG CCGAGGCCGA GAACCGCCGC CTGCTGGCGC GCGACGTGGC CGACGCACTT
GAGCTGCCGA TCGGCAACGC GGTGGACTTC TGGACCGAGG CCTCGCTGTT CTCGGCCGGT
GGCTACACCA CGCTGGTGTT CGGCCCGGGT GACATCGCCC AGGCCCATAC CGCCGATGAG
TTCGTAACGC TGGACCAGCT GCAGCGCTAC ACCGACGCCG TTCACCGCAT CATTGCTGCC
GGCGCCTGA
 
Protein sequence
MLEQTLDHLQ ALVSFDTRNP PRAITTGGIF DYLRDNLPGF NVEVIDHGAG AVSLYAVRGT 
PKYLFNVHLD TVPDSPHWSA DPHVMRRLDD RVVGLGVCDI KGAAAALVAA ANASDGDAAF
LFSSDEEAND PRCIAAFLAR GIPYEAVLVA EPTMSEAVLA HRGISSVLMQ FSGRAGHASG
KQDAAASALH QAMRWGNRAL DHVESLASAR FGGLTGLRFN IGRVEGGIKA NMIAPAAEVR
FGFRPLPSMD IDGLLATFAG FAEPEAALFT ETFRGPSLPA GDIAEAENRR LLARDVADAL
ELPIGNAVDF WTEASLFSAG GYTTLVFGPG DIAQAHTADE FVTLDQLQRY TDAVHRIIAA
GA