Gene Smal_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2707 
Symbol 
ID6477197 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp3018899 
End bp3019885 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content73% 
IMG OID642731893 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002029090 
Protein GI194366480 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4235] Cytochrome c biogenesis factor 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCACT GGTTGCCGCT GCTGGCAGGT GTGACCGCTG CGTTGATGGC AGTGCTGGTG 
CTGTGGCCGC TTCGCCATCA CGGCCGCCGC GGTTTCGCGC TGGCGGCACT GGCGCTGGGC
GTAACGGGCG CCTGCCTGTA CCTGCTGGTG GGAGACCCGC GTGCGGCGCA GGTGCAGCCT
GCGCCGTCGG TGGCCACCCT GCGTGACGGC GTGCAGGCCC TGCAGGATGC GTTGCAGCGT
GATCCGCAGC GCGCCGACGG CTGGGCGTTG CTGGGACGTT CGCAGGCCGA GCTGGGCAAC
ACGCCGGCTG CGGCGGAGGC CTTCGCACGT GCCGCCGCCC TGGCCCCGGA TGACCCCGGC
GTGCTGGTGG AAGCGGCGCA GGCACGTGCG CAGGCCGATG CCGGCAAGCA GTTCGATGAC
ACCGCGATGG CCTGGTTGCA GCAGGCTCGT GCGCTGGCGC CCGATGCAGA GCGCGCCAGC
TGGCTGCTGG GCATCGCCCT GCGCCAGCGC GGAAAGAACG CCGAGGCTGC CGACGTCTGG
AGCGGCCTGC TGCCACGGCT TGAGCCCGGC GCCGCGCAGG CGCTGCAGGC GCAGATCGCC
ATCGCCCGCG AAGCCGCCGG CCAGGCGCCC GATGCTGCCG CTGCGGCGCC ACCGGCGCTA
CTGCAGGTGC GCGTGCAGCT GCCGGCGCTG AAGAACACCG AGTGGCCCGC CAGCACCCAG
GTATTCGTGC TGGCCCGCGC CGTGGGTGGA CCGCCGATGC CGGTGGCCGC ACGCAAGCTG
CCGCTGGCGG GCTTCCCGGC CACGGTCGGG CTGGGCGACG CAGACAGCCC GATGCCGACC
GCACCGCTGT CGGCCCATCG CGAAGTGGAA GTGCTGGCGC GCATCTCGCG CAGCGGCAGC
GCCAACCGCA GCGAGGACGA TCTGCAGAGC ACGCCGGTGA AGGTGAGCCT GCCGCATGAA
GGCGTGGTTG AGCTGCGGTT CCCGTAG
 
Protein sequence
MSHWLPLLAG VTAALMAVLV LWPLRHHGRR GFALAALALG VTGACLYLLV GDPRAAQVQP 
APSVATLRDG VQALQDALQR DPQRADGWAL LGRSQAELGN TPAAAEAFAR AAALAPDDPG
VLVEAAQARA QADAGKQFDD TAMAWLQQAR ALAPDAERAS WLLGIALRQR GKNAEAADVW
SGLLPRLEPG AAQALQAQIA IAREAAGQAP DAAAAAPPAL LQVRVQLPAL KNTEWPASTQ
VFVLARAVGG PPMPVAARKL PLAGFPATVG LGDADSPMPT APLSAHREVE VLARISRSGS
ANRSEDDLQS TPVKVSLPHE GVVELRFP