| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2667 |
|---|
| Symbol | |
|---|
| ID | 6477157 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2975882 |
|---|
| End bp | 2977447 |
|---|
| Gene Length | 1566 bp |
|---|
| Protein Length | 521 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642731853 |
|---|
| Product | TGF-beta receptor type I/II extracellular region |
|---|
| Protein accession | YP_002029050 |
|---|
| Protein GI | 194366440 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3104] Dipeptide/tripeptide permease |
|---|
| TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.63918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.181856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCACG ACGCAGTTGC CCCCATCGCC GGCCAGGGAA AGATGCCGCG CCAGATCCCG
TACATCATCG GCAATGAGGC CTGCGAGCGG TTCAGTTTCT ATGGGATGCG CAACATCCTG
GTGCAGTTCC TGATCACCTC GCTGCTGCTG CAGGAAATCA CTGCGGAAGG CCGTGCCGGT
GAAGCCAAGG ACATCATGCA CAGCTTCATG ATCGGCGTGT ATTTCTTCCC GCTGCTCGGT
GGCTGGCTGG CTGACAAGTT CTTCGGCAAG TACCACACCA TCCTCTGGTT CAGCCTGGTC
TACTGCGCCG GTCACCTGTG CCTGGCGTTG TTCGAGAACA GCCGCGAAGG CTTCTTCCTC
GGCCTGGGCC TGATCGCGCT CGGTGCCGGC GGCATCAAGC CGCTGGTGGC CTCGTTCATG
GGCGACCAGT TCGACCAGAG CAACAAGCAC CTGGCCAAGA TCGTTTTCGA CGCCTTCTAC
TGGATCATCA ACTTCGGCTC GCTGTTTGCC TCGCTGCTGA TCCCGCTGGT GCTGAAGAAC
TGGGGCCCGC AGTGGGCGTT CGGCATCCCG GGCATCCTGA TGTTCATCGC CACCTTCGTG
TTCTGGCTGG GCCGCAAGCG CTACGTGCTG GTGCCGCTGC CGCCGAAGGA CCCGCATTCG
TTCGCCAACG TGGTGCGTAC CGCCCTGACC GCGCGCGTCG CCGGCCAGGG CCGTCCGGGC
CTGGTGATCG CCGTGCTCGG CCTGGTACTG GCGGCAGCCT CGTTCGGCCT GGTCGGTTCG
CTCGGCATCG TGATCTGCCT GTGCCTGGCG CTGGTCGCCA TCCTCGCTGG CATCGGTGGC
GGCACCTGGC TGCAGCTGGA CCGCGCCCGC GGCCAGCATC CGGCCGAAGC CGTGGAAGGC
GTGCGTTCGG TGCTGCGCGT GCTGGTGATC TTCGCGCTGA CCACGCCGTT CTTCTCGCTG
TTCGACCAGA AGGCCTCGAC CTGGGTCCTG CAGGGCCAGC AGATGCAGAT GCCGAGCTGG
TTCACCGCCT CGCAGATGCA GGCGCTGAAC CCGCTGCTGG TGATGATCCT GATTCCATTC
AACAACCTGG TGCTGTACCC GGCCCTGCGC CGCTTCGGTT TCGAACCGAC CGCGCTGCGC
CGCATGACCG CCGGTATCGC CTTCAGCGGC CTGGCCTGGA TCGTGGTGGG TGGCATCCAG
GTGGTGATGG ATGGCGGCAA TGCGATGTCG ATCTTCTGGC AGATGCTGCC GTATGCGCTG
CTGACCTTCG GTGAGGTGCT GGTCTCGGCC ACCGGCCTGG AGTTTGCCTA CAGCCAGGCG
CCGCAGGCCA TGAAGGGCGT GGTAATGAGC TTCTGGAACC TGACCACCAC CATCGGCAAC
CTGTGGGTAC TTCTGTCCAA CGCCGCGGTG CGCAACGACA CGGTGACCCA CCAGATTGCC
GGAACCGGGC TGAGCGAGGC GGCGTTCCTG ATGTTCTTCT TCGCCGGTTT CGCTTTCATC
GCGGCGTTGG CTTTCGGTTG GTACGCGAAA CGCTATCGTA TGGTCGACAA CTACCGTAGC
GCCTGA
|
|---|
| Protein sequence | MSHDAVAPIA GQGKMPRQIP YIIGNEACER FSFYGMRNIL VQFLITSLLL QEITAEGRAG
EAKDIMHSFM IGVYFFPLLG GWLADKFFGK YHTILWFSLV YCAGHLCLAL FENSREGFFL
GLGLIALGAG GIKPLVASFM GDQFDQSNKH LAKIVFDAFY WIINFGSLFA SLLIPLVLKN
WGPQWAFGIP GILMFIATFV FWLGRKRYVL VPLPPKDPHS FANVVRTALT ARVAGQGRPG
LVIAVLGLVL AAASFGLVGS LGIVICLCLA LVAILAGIGG GTWLQLDRAR GQHPAEAVEG
VRSVLRVLVI FALTTPFFSL FDQKASTWVL QGQQMQMPSW FTASQMQALN PLLVMILIPF
NNLVLYPALR RFGFEPTALR RMTAGIAFSG LAWIVVGGIQ VVMDGGNAMS IFWQMLPYAL
LTFGEVLVSA TGLEFAYSQA PQAMKGVVMS FWNLTTTIGN LWVLLSNAAV RNDTVTHQIA
GTGLSEAAFL MFFFAGFAFI AALAFGWYAK RYRMVDNYRS A
|
|---|
| |