Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2656 |
Symbol | |
ID | 6477146 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2965161 |
End bp | 2966057 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 642731842 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002029039 |
Protein GI | 194366429 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.201374 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.110836 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGCCG AAACCGCTTT CCAGACCCAC CGCCCGCGCC TGATGGCGCT GGCCTACCGC CTGCTCGGCA GCCGCGCCGA CGCCGAAGAC GTGGTCCAGG ATGCCTGGCT GCGCTGGTCC AGGGCGGACC CGACCAGCGT CCGCGATCCC GAGGCGTGGC TGGTCACCAC CACCACCCGG CTCGGCCTGG ACCGGCTGCG CGCGGCCAAG CGCGAGCGCG TGCACTACGT CGGCCCATGG CTGGCCGAGC CGCTGGCGGT CAGCCTGGAG CCGGATCCGG CGCCCGGCCC GGCGCAGCTG CATGCGCTGG CCGACGACAT CTCGGTCGCC TTCCTGACCC TGCTCGAACA GCTCGGCCCC GAGGAGCGCG CCGCCTTCCT GCTGAAGGAA GCCTTCGACC ACGACTACCG CGAAATCGCC GAGCTGATCG GCCACAGCGA AGCCAACTGC CGCCAGCTGG TGCACCGTGC CCGGCAGCGC CTGCAGTCTG GGCGGCCACG CTTCAATGCC GATGCCAGCC AGCACCGGCA GCTGCTGGCA CGCTTCATGG ACGCCTCCCA ACGCGGAGAC AGCGAGGGGA TCCAGGCCCT GCTGCACGCC AATGCGCAGC TGGTTTCCGA TGGCGGCGGC GTGGTTACCG CCGCGGTCCG CCCGCTGCTC GGCGCCGAAC GCATCGGCCG CCTGTTCTGG GCCATCGCGC GCCGCGGTGC GGTGCATCCG GCGCAGCTGG GCTACGTCAA CGGCGAGCCG GCGATCCTGC GCTTCATCGG TGATCGCCTG CACTCGGTCA CCACCATCGA GGTGGTCGCT GGCCGCATCG CCAACGTGTA CAGCGTGCTG AATCCGGAAA AGTTGCCGGG GGTTGTCACG CGCGGCGACA CTGCGGCGTC CTGGTAG
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Protein sequence | MNAETAFQTH RPRLMALAYR LLGSRADAED VVQDAWLRWS RADPTSVRDP EAWLVTTTTR LGLDRLRAAK RERVHYVGPW LAEPLAVSLE PDPAPGPAQL HALADDISVA FLTLLEQLGP EERAAFLLKE AFDHDYREIA ELIGHSEANC RQLVHRARQR LQSGRPRFNA DASQHRQLLA RFMDASQRGD SEGIQALLHA NAQLVSDGGG VVTAAVRPLL GAERIGRLFW AIARRGAVHP AQLGYVNGEP AILRFIGDRL HSVTTIEVVA GRIANVYSVL NPEKLPGVVT RGDTAASW
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