Gene Smal_2656 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2656 
Symbol 
ID6477146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2965161 
End bp2966057 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content71% 
IMG OID642731842 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002029039 
Protein GI194366429 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.201374 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.110836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG AAACCGCTTT CCAGACCCAC CGCCCGCGCC TGATGGCGCT GGCCTACCGC 
CTGCTCGGCA GCCGCGCCGA CGCCGAAGAC GTGGTCCAGG ATGCCTGGCT GCGCTGGTCC
AGGGCGGACC CGACCAGCGT CCGCGATCCC GAGGCGTGGC TGGTCACCAC CACCACCCGG
CTCGGCCTGG ACCGGCTGCG CGCGGCCAAG CGCGAGCGCG TGCACTACGT CGGCCCATGG
CTGGCCGAGC CGCTGGCGGT CAGCCTGGAG CCGGATCCGG CGCCCGGCCC GGCGCAGCTG
CATGCGCTGG CCGACGACAT CTCGGTCGCC TTCCTGACCC TGCTCGAACA GCTCGGCCCC
GAGGAGCGCG CCGCCTTCCT GCTGAAGGAA GCCTTCGACC ACGACTACCG CGAAATCGCC
GAGCTGATCG GCCACAGCGA AGCCAACTGC CGCCAGCTGG TGCACCGTGC CCGGCAGCGC
CTGCAGTCTG GGCGGCCACG CTTCAATGCC GATGCCAGCC AGCACCGGCA GCTGCTGGCA
CGCTTCATGG ACGCCTCCCA ACGCGGAGAC AGCGAGGGGA TCCAGGCCCT GCTGCACGCC
AATGCGCAGC TGGTTTCCGA TGGCGGCGGC GTGGTTACCG CCGCGGTCCG CCCGCTGCTC
GGCGCCGAAC GCATCGGCCG CCTGTTCTGG GCCATCGCGC GCCGCGGTGC GGTGCATCCG
GCGCAGCTGG GCTACGTCAA CGGCGAGCCG GCGATCCTGC GCTTCATCGG TGATCGCCTG
CACTCGGTCA CCACCATCGA GGTGGTCGCT GGCCGCATCG CCAACGTGTA CAGCGTGCTG
AATCCGGAAA AGTTGCCGGG GGTTGTCACG CGCGGCGACA CTGCGGCGTC CTGGTAG
 
Protein sequence
MNAETAFQTH RPRLMALAYR LLGSRADAED VVQDAWLRWS RADPTSVRDP EAWLVTTTTR 
LGLDRLRAAK RERVHYVGPW LAEPLAVSLE PDPAPGPAQL HALADDISVA FLTLLEQLGP
EERAAFLLKE AFDHDYREIA ELIGHSEANC RQLVHRARQR LQSGRPRFNA DASQHRQLLA
RFMDASQRGD SEGIQALLHA NAQLVSDGGG VVTAAVRPLL GAERIGRLFW AIARRGAVHP
AQLGYVNGEP AILRFIGDRL HSVTTIEVVA GRIANVYSVL NPEKLPGVVT RGDTAASW