Gene Smal_2648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2648 
Symbol 
ID6477138 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2959115 
End bp2959609 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content67% 
IMG OID642731834 
Product17 kDa surface antigen 
Protein accessionYP_002029031 
Protein GI194366421 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3133] Outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.406999 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.161516 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC AGCTCATCGC TGCCAGTGCC ATCGCAACCC TCGCCCTGGC TGGCTGTGCC 
ACCCCCGGCG GCTACGGTGG CGGCGGTTAC AACAATGGCT ACAACAACGG CGGCTACGGC
AACAACGGGG GCTACAACCA GGGCCGTTGC GCCGACTGCG GCATCGTCAC CCGCATCAAC
ACCGTGCAGT CCGGCCGCAC CGCGCCCAGC GCCACCGGCG CGATCCTCGG CGGCATCGTC
GGCGCCGTGG CCGGCCACGA GATCTCCGAC CATACCGGCG GCAGCCGTGG CAACAAGAAC
ATCGCCGCCG CTGCAGGCGC GGTCGGTGGC GCCCTGGCCG GCAACCAGAT CCAGAAGAAC
GTGACCAGCG ACACCTACGA CATCAGCGTG CGCATGGACG ATGGCCGCAC CATCGTGGTC
AATCAGCGTG ACCTCGGCGG CATCCGCGAG AACACCTATG TGCGCGTGGT CAACGGCAAG
GTCATCCTGC GCTGA
 
Protein sequence
MKIQLIAASA IATLALAGCA TPGGYGGGGY NNGYNNGGYG NNGGYNQGRC ADCGIVTRIN 
TVQSGRTAPS ATGAILGGIV GAVAGHEISD HTGGSRGNKN IAAAAGAVGG ALAGNQIQKN
VTSDTYDISV RMDDGRTIVV NQRDLGGIRE NTYVRVVNGK VILR