Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2643 |
Symbol | |
ID | 6477133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2955570 |
End bp | 2956412 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642731829 |
Product | 17 kDa surface antigen |
Protein accession | YP_002029026 |
Protein GI | 194366416 |
COG category | [S] Function unknown |
COG ID | [COG3134] Predicted outer membrane lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.796605 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.311018 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGCA CAACTACAAC TGTCCTGGTC GCAGCGGGCG CGCTGCTGGT CGGTGGCATC GCCACCGCCG CCTTCATGAA GAGCGGCGAC ACGTCGCCCG ATTCCATCAG CGCCGGAACC CCCAATGGTG AATCGCGCCT GGTCGACGGC AACGCCGCTG ACGATGGCGC ACGTGCTGAC ACGCTCGACC CGTCGGCGCC GCGCGGCCTG GAATACGCCG ACGTGCTGAA GGTCGACCCG ATCACTGAGA AGCAGAAGGC CTATGCCACT GTGATTGGTA CCGATGCGGT GCGTGAGACC TCCACCACAC AGACCCCGCA TGAAGTCTGC CAGGACGTGA CGGTGCAGGA GCGCCTGCCG GAGCGTGATG GCAACGTCGG TGGCACCGTG GTCGGCGCCG TGGTCGGTGG CCTGCTCGGC AACCAGGTCG GTGGTGGCAA CGGCAAGAAG GCCGCGACCG CGGCTGGCGC CGTGGCCGGT GGCTTCATCG GCAACCAGAT CGACAAGCGC CATGTGGGTG GCCGTGTGGT CAACCGCACC GAGCGCCAGT GCCACACCGA GACCGCAACG TCCGAGTCGA GCCGCGTCAC CGGCTACAAC GTGACCTACC GCAACGAGGA CGGCACCACC GGCACCATGC GCATGGCCAG CAAGCCGGGC AACCGCATCG CCATGGGCAC CAACGATGTG GTCAAGGGTT ACAACGTGAC CTATCGCTAT GACGGTGCAG AGAAGACCGT GCGCCTGGAC AACAAGCCGG CCAGCGATCG CCTGCCGGTG GTCGATGGCC AGCTGGTCAC GCAGACCGCG GCCGCCGGTG CTACCGCCGC GACCCGCCAG TAA
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Protein sequence | MKSTTTTVLV AAGALLVGGI ATAAFMKSGD TSPDSISAGT PNGESRLVDG NAADDGARAD TLDPSAPRGL EYADVLKVDP ITEKQKAYAT VIGTDAVRET STTQTPHEVC QDVTVQERLP ERDGNVGGTV VGAVVGGLLG NQVGGGNGKK AATAAGAVAG GFIGNQIDKR HVGGRVVNRT ERQCHTETAT SESSRVTGYN VTYRNEDGTT GTMRMASKPG NRIAMGTNDV VKGYNVTYRY DGAEKTVRLD NKPASDRLPV VDGQLVTQTA AAGATAATRQ
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