Gene Smal_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2643 
Symbol 
ID6477133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2955570 
End bp2956412 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content67% 
IMG OID642731829 
Product17 kDa surface antigen 
Protein accessionYP_002029026 
Protein GI194366416 
COG category[S] Function unknown 
COG ID[COG3134] Predicted outer membrane lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.796605 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.311018 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGCA CAACTACAAC TGTCCTGGTC GCAGCGGGCG CGCTGCTGGT CGGTGGCATC 
GCCACCGCCG CCTTCATGAA GAGCGGCGAC ACGTCGCCCG ATTCCATCAG CGCCGGAACC
CCCAATGGTG AATCGCGCCT GGTCGACGGC AACGCCGCTG ACGATGGCGC ACGTGCTGAC
ACGCTCGACC CGTCGGCGCC GCGCGGCCTG GAATACGCCG ACGTGCTGAA GGTCGACCCG
ATCACTGAGA AGCAGAAGGC CTATGCCACT GTGATTGGTA CCGATGCGGT GCGTGAGACC
TCCACCACAC AGACCCCGCA TGAAGTCTGC CAGGACGTGA CGGTGCAGGA GCGCCTGCCG
GAGCGTGATG GCAACGTCGG TGGCACCGTG GTCGGCGCCG TGGTCGGTGG CCTGCTCGGC
AACCAGGTCG GTGGTGGCAA CGGCAAGAAG GCCGCGACCG CGGCTGGCGC CGTGGCCGGT
GGCTTCATCG GCAACCAGAT CGACAAGCGC CATGTGGGTG GCCGTGTGGT CAACCGCACC
GAGCGCCAGT GCCACACCGA GACCGCAACG TCCGAGTCGA GCCGCGTCAC CGGCTACAAC
GTGACCTACC GCAACGAGGA CGGCACCACC GGCACCATGC GCATGGCCAG CAAGCCGGGC
AACCGCATCG CCATGGGCAC CAACGATGTG GTCAAGGGTT ACAACGTGAC CTATCGCTAT
GACGGTGCAG AGAAGACCGT GCGCCTGGAC AACAAGCCGG CCAGCGATCG CCTGCCGGTG
GTCGATGGCC AGCTGGTCAC GCAGACCGCG GCCGCCGGTG CTACCGCCGC GACCCGCCAG
TAA
 
Protein sequence
MKSTTTTVLV AAGALLVGGI ATAAFMKSGD TSPDSISAGT PNGESRLVDG NAADDGARAD 
TLDPSAPRGL EYADVLKVDP ITEKQKAYAT VIGTDAVRET STTQTPHEVC QDVTVQERLP
ERDGNVGGTV VGAVVGGLLG NQVGGGNGKK AATAAGAVAG GFIGNQIDKR HVGGRVVNRT
ERQCHTETAT SESSRVTGYN VTYRNEDGTT GTMRMASKPG NRIAMGTNDV VKGYNVTYRY
DGAEKTVRLD NKPASDRLPV VDGQLVTQTA AAGATAATRQ