Gene Smal_2616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2616 
Symbol 
ID6477106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2922565 
End bp2923914 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content65% 
IMG OID642731802 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_002028999 
Protein GI194366389 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1004] Predicted UDP-glucose 6-dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.587392 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.111464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGTTG CGATTTTTGG TACCGGCTAC GTTGGACTGG TGACCGGCAC CTGCCTGGCC 
GACGTCGGCC ATCAGGTGGT CTGCGTCGAC ATCGACCAGG CCAAGGTGGA TGGCCTCAAC
CAGGGCATCA TCCCGATCTA TGAGCCGGGC CTGGAGCCGA TGGTGAAGGC CAACCATGCC
GCCTTGCGGC TGGCATTCAC CACCGACGCT GAGGCTGCCA TCGATCACGG CCAGGTCGTT
TTCATCGCCG TCGGCACGCC GCCGGACGAG GATGGCAGCG CCGATCTGCA GTACGTGCTG
GCCGTGGCCC GCACCATTGG CCGGTACATG AGTGTGCCGA CCGTGGTGGT CAACAAGTCG
ACGGTGCCGG TGGGTACCGC CGACAAGGTG CGCGCGGCCA TTGCCGAAGA GCTGGCTGCG
CGTAACGCGG ACATCGCCTT CGATGTGGTG TCCAACCCGG AGTTCCTGAA GGAAGGCGAC
GCGGTTGCCG ACTGCATGCG CCCGGACCGC ATCATCATCG GTGCGACCAG CGAAGAATCG
GTGGCGGTGA TGCGTCGCCT GTATGCGCCG TTCAACCGCA ACCACGACCG CGTGGTGGAA
ATGGACGTAC GTTCGGCCGA ACTGACCAAG TACGCGGCCA ACGCGATGCT GGCGACCAAG
ATTTCGTTCA TGAACGAAAT CGCCAACATC GCCGAGCGTG TCGGTGCCGA CGTCGAGCAG
GTCCGCCAGG GCATCGGTTC GGACCCGCGT ATCGGCTGGC ACTTCATCTA TCCGGGTGCC
GGCTACGGCG GCTCGTGCTT CCCCAAGGAT GTGCAGGCGC TGGCCCGCAC CGCGCAGCAG
TACGGCCTCG AGCCGAAGCT GCTGAACGCG GTGGAAGCGG TCAACGATGC ACAGAAGGGC
CATCTGTTCG CCCTCATCCA GCGCCACTAT GACAAGGGCG AGGACGAAGG CGTGCGCGGC
AAGACGTTTG CGGTGTGGGG CCTGGCCTTC AAGCCGAACA CCGACGACAT GCGCGAAGCC
TCCAGCCGTC GCCTGCTGGC GCAGCTGTGG GAAGGTGGTG CGACGGTGCG GGCGTATGAC
CCGGAAGCGA TGCACGAATC GCAGCGCATC TTCGGCGAGC GTGACGACCT GGTGTTCTGC
AGCAGTGCCG ACGAAGCGCT GCAGGGTGCC GACGCGCTGG TCGTGGTGAC CGAGTGGAAG
CAGTTCCGCA GCCCCGATTT CCAGAAGCTG CGCGAGCAGT TGAAGGACGC GGCGGTGTTC
GATGGCCGCA ATCTGTACGA GCCGGCCGAG GTGGAAGCTG CAGGCCTGGC CTACTACGGC
ATCGGCCGGG GGCGTTCGTT GCATGTCTGA
 
Protein sequence
MRVAIFGTGY VGLVTGTCLA DVGHQVVCVD IDQAKVDGLN QGIIPIYEPG LEPMVKANHA 
ALRLAFTTDA EAAIDHGQVV FIAVGTPPDE DGSADLQYVL AVARTIGRYM SVPTVVVNKS
TVPVGTADKV RAAIAEELAA RNADIAFDVV SNPEFLKEGD AVADCMRPDR IIIGATSEES
VAVMRRLYAP FNRNHDRVVE MDVRSAELTK YAANAMLATK ISFMNEIANI AERVGADVEQ
VRQGIGSDPR IGWHFIYPGA GYGGSCFPKD VQALARTAQQ YGLEPKLLNA VEAVNDAQKG
HLFALIQRHY DKGEDEGVRG KTFAVWGLAF KPNTDDMREA SSRRLLAQLW EGGATVRAYD
PEAMHESQRI FGERDDLVFC SSADEALQGA DALVVVTEWK QFRSPDFQKL REQLKDAAVF
DGRNLYEPAE VEAAGLAYYG IGRGRSLHV