| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2581 |
|---|
| Symbol | |
|---|
| ID | 6477071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2879558 |
|---|
| End bp | 2880514 |
|---|
| Gene Length | 957 bp |
|---|
| Protein Length | 318 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642731767 |
|---|
| Product | Lysine--tRNA ligase |
|---|
| Protein accession | YP_002028964 |
|---|
| Protein GI | 194366354 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
|---|
| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGCGAGG CCCTGCTGCG CGCGCTGCAG CAGCGCGCCG CGCTGAACGC GCTGCTGCGC
CGCTTCTTCG CCGAGCGCGA TGTGCTGGAA GTGGAAACCC CGATCCTGTC GGTGGCCGGC
AACACCGAGC CGAACATCGA CAGCTTCCAC ACCGATTTCA CCGGGCATGT CGATGCCGGT
GGCCGCCGCC GCTGGTTGCG CACCTCACCG GAGTATCCGC TCAAGCGCCT GCTCGCTGCG
GGCGTCGGCG ACTGCTATGA GCTGGGCCGT GTGTTCCGCA ATGGCGAAGC GGGTGGTCGC
CACAATCCGG AATTCACCAT GCTGGAGTGG TACCGGGTCG GCTGGGATCA CCATAGGCTG
GTGCAGGAAA CCGCCGAGTT GGTCGGGCTG GCGCTGGCGC TGGTCGGGCG CAGCGCCCGC
TTGCGCGTGT TGAGTTATCG CGAGCTGTTC CAGCAGCATG TAGGCGTGGA TCCGTTCGGT
GCCGATGAAG CCGCGCTGCG TGCCGCACTG GGCGACGTGC ATATCGATCC GGTCGGGTTG
ACCCGCGACG ACTGGCTGGA CCTGCTGATG ACCCACCACA TCCAACCGCA CTTCGATGAC
GCGGTCATGA CCGTGGTCCA CGACTGGCCG GCCAGCCAGG CCGCGTTGGC GCGCATCCGC
CCCGGCACGC CGCCGTTGGC CGAGCGTTTC GAGCTGTACC TGGGGGCGGT GGAGCTGGCC
AACGGCTATC ACGAACTGAA CGACGCGCAG GAGCAGCGTG TGCGCTTCCA GCGTGATCTG
CAGCGTCGGC ACGAGCGTGG GCAGGTGCAG CCGGCGCTGG ATGAGGCGCT GCTGGCAGCG
CTGCCGTCGA TGCCGGCCTG TGCCGGCGTG GCAGTGGGCA TCGATCGCCT GCTGATGGCG
ATGAACCGCA CACCGCGCAT CGCCGATGTG CTTGCCTACG ATTTTGCCCG CGCCTGA
|
|---|
| Protein sequence | MSEALLRALQ QRAALNALLR RFFAERDVLE VETPILSVAG NTEPNIDSFH TDFTGHVDAG
GRRRWLRTSP EYPLKRLLAA GVGDCYELGR VFRNGEAGGR HNPEFTMLEW YRVGWDHHRL
VQETAELVGL ALALVGRSAR LRVLSYRELF QQHVGVDPFG ADEAALRAAL GDVHIDPVGL
TRDDWLDLLM THHIQPHFDD AVMTVVHDWP ASQAALARIR PGTPPLAERF ELYLGAVELA
NGYHELNDAQ EQRVRFQRDL QRRHERGQVQ PALDEALLAA LPSMPACAGV AVGIDRLLMA
MNRTPRIADV LAYDFARA
|
|---|
| |