| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2577 |
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| Symbol | |
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| ID | 6477067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2871986 |
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| End bp | 2874508 |
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| Gene Length | 2523 bp |
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| Protein Length | 840 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642731763 |
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| Product | membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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| Protein accession | YP_002028960 |
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| Protein GI | 194366350 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.135772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.263585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCA CGCCGCAGTC TGCTTCCGCG CCTCCGCCCC GCCATCCTCT GGTCACCGTG
CTGTCGCTGC TGCTGGTCGT GCTCGGCCTG GTCATCGGCG GGCTCGGTGC GTGGCTGCTC
AGCCTCGGTG GCTCGGCGTA CTACGCCATC GCCGGCCTGG GGCTGCTGGT CAGTGGCATC
CTGCTGTTCG GCAACCGCCG CAGTGGCGCA CTGCTGTACG CACTGGTGTT CGTGGGCACG
TTGCTGTGGA CCTGGTGGGA ATCGGGCAGC GACTACTGGC GCTGGGTGCC ACGGCTGGGC
CTGGTGACCG CGCTGGGCAT CGTGCTGGCG CTGCTGGCGC CGACGCTGCG CGAGCCGGTT
TCAAAACGTC TGTCGCGCAG TGTCGCCGGT GTGCTGATGC TGGTGTTCGT GGCTGCGTTT
GGCCTGGCTT TCGCCCCGCA TGGTGAAGTG GACGGGCACC TGCCGTTCCC GGAAGGCGCA
GTCAGCGCCG GGCTGGAACC TACGCGCGAC ACCACCGGTC TGCAGCCGGC TGACCAGCCC
GCCGAGGGCG ACTGGCCCGC GTGGGGCCGC AGCAATGCGG GCACCCGCTA TTCGCCCCTG
CAGCAGATCA CCCCGGCCAA TGTGGCCACG CTGCAGCCGG CCTGGCAGTT CCGCACCGGT
GACCTGCCGA AGAAGCGCTG GGGCGCGGAA ACCACGCCGC TGAAGGTCGG CGACCGCCTG
TACCTGTGCA CCGCGCGCAA CCGTCTGATC GCGCTTGATG CTGCCAGTGG CAAGGAACTG
TGGCGGTTCG ATCCGAAGGT GAAGGACGCC TCGATCCCGT ACACCGCCGC CTGCCGTGGC
GTGAGCTACT ACGAGCAGCC GAGCGCGCCT ACGATGGCCG ATGCGGCGCT GGCCGATGTC
GCGGCCGATC TGGCGCTGCC CGAACCACCG CCCAGCGTCA CCCGCAGCGC TACGCCGGGC
AGTCATCCCG CGTGCTGGGC CCGCATCATC GAAGGCACCC TGGACGGCCG CATCATCGCG
GTGGACGCAG ACAGCGGCCG TCCGTGCGCC AACTTCGGCA ACAACGGCCA GGTCGACATC
ACCCTTGGCA TGGGCGAAGT GCCCCCTGGC TACGTGTCGA TCAACTCGCC ACCGGCAATC
GTGCGAGGCG TGATCGTGAC CGGTCACCAG GTGTTGGATG GGCAGCGCCG CGACGCGCCC
TCGGGCGTGA TCCAGGCCTA CGACGCGATC ACCGGCAAAC TGCGCTGGGC GTGGGACATG
GACCAGCCCG AGCGCAACGG CCTGCCGCCG CGCGAGCAGA CTTACACGCG TGGCACGCCG
AACATGTGGA CCACCGCGAC CGGCGATGAG GCGCTGGGCC TGGTCTACCT GCCACTGGGC
AACTCGGCGG GCGACTACTG GAGTGGCTCA CGCAGCGAAA ACCAGAACCG CTATTCGACC
TCGCTGGTGG CGATCGACGT GGCCACCGGC AAGCCGGCCT GGCATTTCCA GGCGGTGCGC
AAGGACGTGT GGGATTACGA CCTGGGTTCG CAGGCCAGCC TGATCGATTA CCCGACCGCT
GCCGGCAAAG TGCCGGCGAT CCTGTTGCCG ACCAAGCAGG GCGACATCTA CATCCTCGAC
CGCCGCAACG GCCAGCTTCT GACCGCGGCC GAAGAGCGCA AGGTGCCCAT CGGTGGTGTT
GAGCCCGAGC AGCGCTCGCC CACGCAACTG TTCTCGCTGT ATCACACGTT GCGCCGCGAG
CATGAGCTGA CCGAGCGCGA CATGTGGGGC ATCACCCCGA TCGACCAGCT GGTCTGCCGC
ATCCAGTTCC GCAAGGCCTA CTACGAAGGT TTCTACACGC CGCCGAGCAG TGACCGCCAT
TCCATCGAGT ACCCCGGCTA CAACGGCGGC TCGGACTGGG GCAGCGTGTC CATCGATACG
CGTCGTGGCG TGATCGTGGC CAACTACAAC GACATGCCCA ACTACAACCG GCTGGTGCCG
CGTGCCGAGG CCGATCGCCT GGGTTGGCTG CCGCGCGAAA AGATCCGGTT CGACAAGGGC
GGCGCTGAGG GCGCGGGCGA CCCACAGGTG GGCACGCCCT ATGCCATCCA GGTCAATGCC
GGTTGGCGCC TGCCGTTCAC CGGTCTGCTG TGCAAGCAGC CGCCCTATGG TGGCATCCGT
GCCATCGACC TGCGCACCGG CAAACTGCTG TGGGACCGCC CGTTCGGCAG TGCACGTGGC
AATGGACCCT TCGGCATCCG CTCCGGCCTG CCGATCGAGA TCGGCACGCC GAACAATGGC
GGCTCGGTGG TGACCGCCAG CGGCTTGATC TTCATCGCCG CCGCCACCGA TGATCTGCTG
CGTGCCATCG ACCTGAAGAC CGGCAAGGAA CTGTGGCACG CCAAGCTGCC TGCCGGTGGC
CAGGCGAACC CGATGGTGTA CGAGCAGGGC GGGCGCCAGT ACGTGGTGAT CATGGCCGGC
GGCCACCATT TCATGGAAAC CCCGAACGGC GATTACGTGA TGGCGTTTGC GTTGCCGAGG
TAA
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| Protein sequence | MSATPQSASA PPPRHPLVTV LSLLLVVLGL VIGGLGAWLL SLGGSAYYAI AGLGLLVSGI
LLFGNRRSGA LLYALVFVGT LLWTWWESGS DYWRWVPRLG LVTALGIVLA LLAPTLREPV
SKRLSRSVAG VLMLVFVAAF GLAFAPHGEV DGHLPFPEGA VSAGLEPTRD TTGLQPADQP
AEGDWPAWGR SNAGTRYSPL QQITPANVAT LQPAWQFRTG DLPKKRWGAE TTPLKVGDRL
YLCTARNRLI ALDAASGKEL WRFDPKVKDA SIPYTAACRG VSYYEQPSAP TMADAALADV
AADLALPEPP PSVTRSATPG SHPACWARII EGTLDGRIIA VDADSGRPCA NFGNNGQVDI
TLGMGEVPPG YVSINSPPAI VRGVIVTGHQ VLDGQRRDAP SGVIQAYDAI TGKLRWAWDM
DQPERNGLPP REQTYTRGTP NMWTTATGDE ALGLVYLPLG NSAGDYWSGS RSENQNRYST
SLVAIDVATG KPAWHFQAVR KDVWDYDLGS QASLIDYPTA AGKVPAILLP TKQGDIYILD
RRNGQLLTAA EERKVPIGGV EPEQRSPTQL FSLYHTLRRE HELTERDMWG ITPIDQLVCR
IQFRKAYYEG FYTPPSSDRH SIEYPGYNGG SDWGSVSIDT RRGVIVANYN DMPNYNRLVP
RAEADRLGWL PREKIRFDKG GAEGAGDPQV GTPYAIQVNA GWRLPFTGLL CKQPPYGGIR
AIDLRTGKLL WDRPFGSARG NGPFGIRSGL PIEIGTPNNG GSVVTASGLI FIAAATDDLL
RAIDLKTGKE LWHAKLPAGG QANPMVYEQG GRQYVVIMAG GHHFMETPNG DYVMAFALPR
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