Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2573 |
Symbol | |
ID | 6477063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2867872 |
End bp | 2869302 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642731759 |
Product | beta-lactamase |
Protein accession | YP_002028956 |
Protein GI | 194366346 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.369136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGGGCTG TTGGACGCCT GTTTCTCTGC AATGCGCTGG CCTGCGGGGT CCTGGTGATC GCCTTGGCGT TTCCGGCAGT TGGCGCAACA TCTGCCGAGC ATGCGCATCC ACGTGCGCAG GATGCCATCG ACGACTGGCT GGCGGCCTTC AATGCGGGCA GCCTCGAGGC GTTGCAGGCA TTCGCCGACA GATATGCGAA GCGGGAGGGA AGCACTCCCA GGGACTATCT CGAGTTCCGC GAGAGCACCG GCCCACTACG CGTGCTGGAA ACACTCGAGA GCGCGCCCAG CCAGGCGAAG CTGCTGGTAA TGGGCCAGCT GAGCGAACGC GCGATGTGGG TGACGGCCGT CATGGATGCG ACCAGCCCGG CGCATGTGAA GCAGTTCCAG ATCGAAGGCA CTGAAACGCC GGACAAGTTC AAGCCGGAGA GGGTTGCTTT GCCTGCGTTG ATGGCCGATG CCACAGCCAA ACTGGAGGCG CTGCGGGCCC AGGACGCGCT GTCGGGTGCG TTGCAGGTGG CACAGAACGG CAATGTGCTG CTGGACTGGC GCGGTGGCGA TGCCGATCGC GCCGCGGGCA TTCCAGTGGG CGTGGATACG CAGTTCCGCC TAGCCTCCTC CAACAAGATG TTCACCTCGG TGGCCATCCT GCAGTTGGTG CAGGATGGCA GGCTTGGGCT GGACGACACC ATCGGCAAGC ATCTGCCGGA CTATCCGAAC AAGGCCGTTG CCGGCACCGT GACCGTGCGC CAGCTGCTGA CCCACACCAG CGGCCTCGGT GATTTCTTCG GCGATGATTT TGAAAGCTAC TCGGCTTCGC TGAGGACGCT GGACGACTAC GTGCAGCGCT TTGCCAAGGA TTCGCCGCAG TTCACGCCAG GCAGCCAGGA CAGCTACTCG AACTATGGCT TTATCGTGCT TGGGCGGATC ATCGAGGCCG TCTCCGGGCA GTCGTACTAC GCCTATGTGG AGCAACACAT CCTGCGCCCG GCAGGCATGA CCGGCACCGG CTTCGAGCCG GAAACAGTGA ACGTCCCGCA GCGTGCCGTC GCCTACACGA AGAAGAATGG GCAATGGATC CGTGAAACGA AGTCGTTGCC CTGGCGTGGC ATGTCGGCCG GTGGTGGTTA CAGCACGGTG GCCGACATGG TGAAATTCGC CGAGGCATTG CGCAGTGGAA GGCTGGTCTC ACCTGCATTG CTGCAGCATG CCACCACGGC GCAGAATCAC AAGGGCTGGT ATGGCTATGG CTTTGTGGTG CAGGGCGAGG GCAGGGAACA TCAGTACGGC CACGAAGGCG GTGCGCCCGG CTCCAACAGC GCCATCGTGG TGCTGCCCGC ACAGGGCTAT GTGATCGTTG GCCTGGCCAA TGTCGATCCG GATGCGATCG GCAACGTGGT CAACTACATC GCGCGTAGAG TGCCGCTGTG A
|
Protein sequence | MRAVGRLFLC NALACGVLVI ALAFPAVGAT SAEHAHPRAQ DAIDDWLAAF NAGSLEALQA FADRYAKREG STPRDYLEFR ESTGPLRVLE TLESAPSQAK LLVMGQLSER AMWVTAVMDA TSPAHVKQFQ IEGTETPDKF KPERVALPAL MADATAKLEA LRAQDALSGA LQVAQNGNVL LDWRGGDADR AAGIPVGVDT QFRLASSNKM FTSVAILQLV QDGRLGLDDT IGKHLPDYPN KAVAGTVTVR QLLTHTSGLG DFFGDDFESY SASLRTLDDY VQRFAKDSPQ FTPGSQDSYS NYGFIVLGRI IEAVSGQSYY AYVEQHILRP AGMTGTGFEP ETVNVPQRAV AYTKKNGQWI RETKSLPWRG MSAGGGYSTV ADMVKFAEAL RSGRLVSPAL LQHATTAQNH KGWYGYGFVV QGEGREHQYG HEGGAPGSNS AIVVLPAQGY VIVGLANVDP DAIGNVVNYI ARRVPL
|
| |