Gene Smal_2561 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2561 
Symbol 
ID6477051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2855613 
End bp2856746 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content66% 
IMG OID642731747 
ProductAgmatine deiminase 
Protein accessionYP_002028944 
Protein GI194366334 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2957] Peptidylarginine deiminase and related enzymes 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC GTCGTCACTT CCTCACCCAG CTGGCGGGCG CCGCCGGCCT TGGCGGCCTG 
GCTGCTCTGG GCCTGGCCGG GCTGCCGGGT CGCGTGGCTG CAGCAGGGCC AGGTGCGGGG
ACTTGGCGCA TGCCGGACGA GCACGGCCCA CAGGAACGCG TGTTCCTTGC CTTCGCCGCG
CAGCCGCGGG TGTGGGGCGC GCAAGCCGAT GCGGTGAACA CCGCCGTGGC GCGGTTGGCC
CGTACCATCG CGCGCCACCA GCCGATCAGC GTGCTGTGCC GTCCGGCGCA GTTGAAGCAG
GCGCAGGATC GCTGTGGCCG TGACAACATC GAGTTCCTGG ACGTGCCCTT GGATGACATC
TGGGTGCGCG ATTACGGTGG TTGCTTCGTC ACCAATGACA AGGGCGGCCT GGGCCTGGTC
GACTTCAACT TCAACGGCTG GGGTGGCAAG CAGAGCGCGC GCAACGATGG CGCGCTGGCG
CCGTGGCTGG CGCAGGTGAC CGGTGCGACG CTGCTGGAAA GCGATCTGGT GGGCGAGGGC
GGAGGCATCG AAGTCGACGG CCACGGCACG GCCATCCTCA CCGAAAGCTG CTGGGTCAAC
CGCAACCGCA ATCCGGACTG GTCGCGCGCG GATATCGAGG CCGAGCTGAA ACATCACCTG
GGTGTGCGCA AGGTGATCTG GCTGCCCGGT ATCGCCGGCA AGGACATCAC CGATGCGCAC
GTGGATTTCT ATGCGCGCTT CGTACGCCCG GGCGTGGTGA TCGCCAATCT GGACAACGAT
CCGGAGTCCT ACGATTACGA TCTGACCCGC GAGCATCTGC GGATTCTGCG CGGGGCCACC
GATGCCGATG GCCGTCGCCT GCAGGTGCAT ACGCTGCCGC CGCCGCTGGA CGGGCGCGAC
AACGTGCATA CCCGCGACAA CAATGATCTG GCGATGGGCT ACATCAACTA CCTGCCGATC
AATGGCGCGG TGGTCGCGCC GCAGTTCGGT GACGACGAAG CCGATGGATT CTGCCGCGAA
CTACTGGAAG ACATGTATCC CGGCCGCGTG ATCGAGCAGG TGGATATCGA TGCCATCGCG
GGTGGTGGTG GCGGCATCCA TTGCGTGACC AAGAACATGC CGAAGGTAGG CTGA
 
Protein sequence
MSNRRHFLTQ LAGAAGLGGL AALGLAGLPG RVAAAGPGAG TWRMPDEHGP QERVFLAFAA 
QPRVWGAQAD AVNTAVARLA RTIARHQPIS VLCRPAQLKQ AQDRCGRDNI EFLDVPLDDI
WVRDYGGCFV TNDKGGLGLV DFNFNGWGGK QSARNDGALA PWLAQVTGAT LLESDLVGEG
GGIEVDGHGT AILTESCWVN RNRNPDWSRA DIEAELKHHL GVRKVIWLPG IAGKDITDAH
VDFYARFVRP GVVIANLDND PESYDYDLTR EHLRILRGAT DADGRRLQVH TLPPPLDGRD
NVHTRDNNDL AMGYINYLPI NGAVVAPQFG DDEADGFCRE LLEDMYPGRV IEQVDIDAIA
GGGGGIHCVT KNMPKVG