Gene Smal_2550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2550 
Symbol 
ID6477040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2843175 
End bp2844716 
Gene Length1542 bp 
Protein Length513 aa 
Translation table11 
GC content69% 
IMG OID642731736 
Producthistidine ammonia-lyase 
Protein accessionYP_002028933 
Protein GI194366323 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2986] Histidine ammonia-lyase 
TIGRFAM ID[TIGR01225] histidine ammonia-lyase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACA CCCTGGTTCT TCGCCCCGGC CATGTCACCC TCGCCCAGTG GCGGCAGGCC 
TATCGCGGTG CACCGCTTGC ACTGGACCCG GCCGCGCTGC CGGCCGTGCG TGCCAGTGCC
GCGACCGTGG CCGCCATCGT CGCCAAGGGC GCACCGGTGT ATGGCATCAA CACCGGCTTC
GGCAAGCTGG CCAGCGTGCG CATCGAGCGC GAAGACCTGG CCACCCTGCA GCGGAACATC
GTGCTCTCGC ACGCTGCCGG TGTTGGCGAG CCGATGCCCG CCAGCGTGGT GCGCCTGATG
ATGGCGCTGA AGCTGGTCAG CCTGGCGCAG GGTGCTTCGG GCATCCGCGA GGAAACCCTG
CTGCTGCTGG AAGCAATGCT GGTCAAGGGC GTGCTGCCGG TGGTGCCCGC ACAGGGCTCG
GTGGGTGCCT CGGGTGACCT GGCGCCGCTC TCGCACCTGG CCAGCGTGAT GCTGGGCGTG
GGCGAAGCCT TCATCGGAGA CGAACGCCTG CCGGCGATCG ATGCACTGTC ACGTGCTGGC
CTGCAGCCCA TCGAGCTGGG TGCGAAGGAA GGCCTGGCGC TGCTCAACGG CACCCAGTTC
TCCACCGCCT ATGCGCTGGC CGGTCTGTTC GAGATCGAGA CCGTGTTCCA GGCCGCACTG
GTCACCGGTG CGCTGTCGGT GGAAGCCGCG AAGGGCTCGG ATACGCCGTT CGATCCGCGC
ATCCATGCCC TGCGTGGGCA GCGCGGTCAG ATCGCAACCG CTGCCACCCT GCGCAGCTTG
ATGCAGGACT CGGGCATCCG CGAATCGCAC CGCGACAACG ACGTGCGCGT GCAGGATCCG
TACTGCCTGC GCTGCCAGCC GCAGGTGATG GGCGCGGCGC TGGACATCCT GCGCCAGGCC
GCGACCACGC TGGAAATCGA AGCCAACGGC GTCTCCGACA ATCCGCTGGT ATTCACCGAG
ACCGGCGAAG CACTGTCCGG GGGCAACTTC CACGCCGAAC CGGTGGCCTT CGCCGCCGAC
ATGCTGGCGA TGGCGGTGTG CGAGATCGGT TCGATCAGCG AGCGCCGCCT GGCGATGCTG
GTGGACCCGG CGCTGTCCGG CCTGCCTGCG TTCCTGACCC CGCGCCCAGG CCTGAATTCC
GGCTTCATGA TCCCGCAGGT GACGGCGGCC GCGCTGGTCT CGGAAAACAA GCAGCGCGCC
TACCCGGCCA GCGTTGATTC GATCCCGACC TCGGCCAACC AGGAAGACCA TGTGTCGATG
GCCGCGCATG GCGCACGCCG CCTGATGCAG ATGGCCGAGA ACGCCGCCAA CGTGATCGGC
ATCGAGCTGC TGGCCGCCGC GCAGGGCTGC GACTTCCACG CGCCGCTGCG CTCCAGTGCC
GCGCTGGAAT CCGTGCGCGC CACCCTGCGT GCGCAGGTGC CGACGCTGGA AGAAGACCGC
TACTTCCACC CGGACATGGT GACCGCCACG AACCTGGTGC GCAGCGGCGC GCTGGCACAG
GGCTTGGCGG AGCTGCTGCC GACCGTGGAA CCGCAGGCAT GA
 
Protein sequence
MSNTLVLRPG HVTLAQWRQA YRGAPLALDP AALPAVRASA ATVAAIVAKG APVYGINTGF 
GKLASVRIER EDLATLQRNI VLSHAAGVGE PMPASVVRLM MALKLVSLAQ GASGIREETL
LLLEAMLVKG VLPVVPAQGS VGASGDLAPL SHLASVMLGV GEAFIGDERL PAIDALSRAG
LQPIELGAKE GLALLNGTQF STAYALAGLF EIETVFQAAL VTGALSVEAA KGSDTPFDPR
IHALRGQRGQ IATAATLRSL MQDSGIRESH RDNDVRVQDP YCLRCQPQVM GAALDILRQA
ATTLEIEANG VSDNPLVFTE TGEALSGGNF HAEPVAFAAD MLAMAVCEIG SISERRLAML
VDPALSGLPA FLTPRPGLNS GFMIPQVTAA ALVSENKQRA YPASVDSIPT SANQEDHVSM
AAHGARRLMQ MAENAANVIG IELLAAAQGC DFHAPLRSSA ALESVRATLR AQVPTLEEDR
YFHPDMVTAT NLVRSGALAQ GLAELLPTVE PQA