| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2548 |
|---|
| Symbol | |
|---|
| ID | 6477038 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2840517 |
|---|
| End bp | 2841887 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 642731734 |
|---|
| Product | N-formimino-L-glutamate deiminase |
|---|
| Protein accession | YP_002028931 |
|---|
| Protein GI | 194366321 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | [TIGR02022] formiminoglutamate deiminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATT CGCGTTCCCC GCACAGTTTC CATGCCGCCC ACGCCCTGCT GGCCGACGGC
TGGGCCCGCG ATGTCCGCCT GCAGGTGCGG GACGGTCGCA TCACGGCGAT CCACACGGGG
CAGGGCGCCC AGCACGGCGA CAACCGCGTC GGCATTCTGG TGCCGGGCCT GCCCAACCTG
CACAGCCACG CCTTCCAGCG CGGCATGGCC GGGCTGACCG AGATCGGCGG CGGCGACGGT
GACAGTTTCT GGAGCTGGCG CGAGCTGATG TACCGCTTCC TGGCCCACCT GCGCCCGGAC
GCGGTGCAGG CCATCGCCGC CCAGGCCTAC ATGGAAATGC TGGAAAGCGG CTTTACCCGC
GTCGGCGAGT TCCACTACCT GCACCACGAC GCCGATGGCC ATCCCTATGC CAACCGCGCC
GAGATGAGTG CGCGGATCGC GGCGGCGGCT GATCAGACCG GCATCGGCCT GACCCTGTTG
CCGGTGTTCT ATGCGCATGC CGATTTCGGC GGTGCGGCCC CGAATCCGGC GCAGCGCCGC
CTGATCCACG ACGTGGACGG CTTCGCGCAG CTGCTGGATG CCGCGAAGCC GGCACTGACC
GCGCTGCCCG ACGCCGTGCT CGGTATCGCG CCGCACAGCC TGCGTGCGGT CACGGGGGAG
GAGCTGAGCG CCCTGCTGCC GCTGACTGAC GGCCCGGTGC ACATCCATAT CGCCGAGCAG
GTACGTGAAG TCGAGGCCTG CCTGGCCTGG AGCGGCCAGC GCCCGGTGCA GTGGCTGTAC
GACCATGCGC CGGTGGATGC GCGCTGGTGC CTGGTGCATG CCACCCACAT CACCGATGAC
GAGCGCGCGT CCATTGTGGC CAGCCAGGCC GTGGCCGGCC TGTGCCCGAT CACCGAGGCC
AACCTGGGCG ACGGCCTGTT CCCGATGCAG GCGTTCGCGC GGGAGGGCGG TCGGTTCGGT
GTCGGTTCCG ATTCCAATGT GCTGATCGAC GCGGCTGAAG AACTGCGCCT GCTTGAGTAC
GGTCAGCGCC TGACCCTGCG CGGGCGCAAC GTACTGGCGC CGGATGCCAC CCGCAGCAGC
GGCCGCTTCC TGTTCGAAGG TGCATTGCAG GGCGGTGCAC AGGCGTTGGG CGTGGCCGCC
GGGCTGCAGG TTGGCGCCAG CGCCGATCTG GTCGAACTGG ATGCCGCACA CCCCGCGCTG
CAGGCGCGAC AGGATGACGC ATGGCTTGAC AGCTGGGTGT TCGCCGCACG TAATGGCGCG
CTGCGATCGG TCTGGCGTCA TGGCCGCCAA TGCGTGGCCG AGGGCCGCCA CCTGCAGCGC
GAGGCGATCA CCACCGCCTT CGCTGCCGCC CTGCGTGGCG TGCTGGGCTG A
|
|---|
| Protein sequence | MSDSRSPHSF HAAHALLADG WARDVRLQVR DGRITAIHTG QGAQHGDNRV GILVPGLPNL
HSHAFQRGMA GLTEIGGGDG DSFWSWRELM YRFLAHLRPD AVQAIAAQAY MEMLESGFTR
VGEFHYLHHD ADGHPYANRA EMSARIAAAA DQTGIGLTLL PVFYAHADFG GAAPNPAQRR
LIHDVDGFAQ LLDAAKPALT ALPDAVLGIA PHSLRAVTGE ELSALLPLTD GPVHIHIAEQ
VREVEACLAW SGQRPVQWLY DHAPVDARWC LVHATHITDD ERASIVASQA VAGLCPITEA
NLGDGLFPMQ AFAREGGRFG VGSDSNVLID AAEELRLLEY GQRLTLRGRN VLAPDATRSS
GRFLFEGALQ GGAQALGVAA GLQVGASADL VELDAAHPAL QARQDDAWLD SWVFAARNGA
LRSVWRHGRQ CVAEGRHLQR EAITTAFAAA LRGVLG
|
|---|
| |