Gene Smal_2501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2501 
Symbol 
ID6476990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2807665 
End bp2808507 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content65% 
IMG OID642731687 
Productpeptidase S14 ClpP 
Protein accessionYP_002028885 
Protein GI194366275 
COG category[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0740] Protease subunit of ATP-dependent Clp proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0232282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCC GGCAGCTGCC TGAAATCCGT GCCGAGCGAC GGCTCGGCGC CGCCCAGTTC 
GACATGCGTC CAGACGCGCT CGAACGCTGG GAGCCCGAAG TTCGCGCCGC CGGCAACGAC
GCGAACAGCA TCTCGATCTA TGACTCCATC GGCGAAAACT GGGAGGGAAC CGGCGTCACC
GCCAAGCGGA TCAGCGCCGC CCTTCGCGCC ATTGGCGACA AGGACGTGGT GGTGAACATC
AACTCGCCCG GCGGTGACTT CTTCGAAGGT GTCGCGATCT ACAACCTGCT GCGCGAGCAC
CAGGGCAGGG TGACCGTCCA GGTTATGGGG CTGGCGGCGT CGGCGGCGTC GGTGATCGCG
ATGGCCGGCG ACGAGATCCT GATGGGTGAC GGATCGTTCC TGATGATCCA CAACGCTTGG
GCGGTGGCGA TCGGCAATCG ACACGACATG GCCGACGCGG CAAAGCTGCT GGAGCCCTTC
GACACGGCCA TGGCCAAGGT CTATGCGGCC CGCTCGGGCG TCACCGAGGC CGAAGCGGCT
CGGATGATGG ACGAGGAGAC CTGGATCGGT GCCGCTCAGG CAGTTGAGGA CGGCTTTGCC
GATGGTCTGC TCGATGGAGC GGCCGCCACC AAGGATGCCA AGCAGCCATC AGGTGGGCGC
AAGGCCCTTG CACTGGTTGA AGCGGCCATG GCCAAGGCCG GCCACTCTCG CTCCATGCGA
CGCGACACCC TGAAATCGCT GTTCAACGGC AAGCCGAGCG CTGCCGAGTC CGCCACGCCG
AGCGCTGGCG GCAACGAAAC CTCGGCCCTG TTGCAGGGCC TTCTCGACAA CATCAAAGCC
TAA
 
Protein sequence
MSLRQLPEIR AERRLGAAQF DMRPDALERW EPEVRAAGND ANSISIYDSI GENWEGTGVT 
AKRISAALRA IGDKDVVVNI NSPGGDFFEG VAIYNLLREH QGRVTVQVMG LAASAASVIA
MAGDEILMGD GSFLMIHNAW AVAIGNRHDM ADAAKLLEPF DTAMAKVYAA RSGVTEAEAA
RMMDEETWIG AAQAVEDGFA DGLLDGAAAT KDAKQPSGGR KALALVEAAM AKAGHSRSMR
RDTLKSLFNG KPSAAESATP SAGGNETSAL LQGLLDNIKA