Gene Smal_2488 details

Gene Information

• Locus tag: Smal_2488
• ID: 6476977
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Stenotrophomonas maltophilia R551-3
• Kingdom: Bacteria
• Replicon accession: NC_011071
• Strand: -
• Start bp: 2791755
• End bp: 2795117
• Gene Length: 3363 bp
• Protein Length: 1120 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642731674
• Product: Carbohydrate-binding CenC domain protein
• Protein accession: YP_002028872
• Protein GI: 194366262

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 36
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCAAGCAA GGAAACTCAC GCTGGTGGAA ATCGGCGTGG GCGCGCTGCC GTCCGCGTCT 
CCGGTCGCCC CGCGCTTTTC CACGTGGTTC CCGGTGCCGT ACAAGGCACC GGACGTGCCG 
CCGGCGAACG GGGTCAGCCC CACGCCGGTG GCCGACGGTG TTGTCCTCGA ATGGGACGCC 
GTCGATCTGG AGGGCGTGAT CTACGTTATC TCGCGTAGCG AAAGCCAGGA CGGCCCCTGG 
ACGGAGATCC ACCGCACCAC CGACACCCGC TACGTCTACA GCGACGGCAG CGGCAAGACG 
TGGTGGTTCC AGATCACCCC GACCGTGCGC GGCAAGACAG GCACTGGAAC CGTGGTGGGG 
GTTGTTCCGC CCACCACATC CAAGGACCTG GCCGAGCAGC AGGCTAGGCT GGCGGAGGAG 
ATCAGGGCTC GGATCCAGGC GATCGCAGAC GAGGCGGCGG CACGCGCTGC TGGGCTGGCG 
CAGGCTGCAC AGGACCTGGT CGCCGAGGCA CTGCTGCGGC AGCAGGGGGT GACCGAGGCC 
ATGCAGGCGA TCAGTGCGGA GGCCCAAGCG CGGATCGACG CGCTCCTGAA CGAGAAGATG 
GAGCGCGAGG CGGCGATCAG CCGCGAGGAG CAGTTGCGAC AGAGCGCTGA TGAATCGTTG 
GCGCGCGCGG TGTCGGAGGT TGCGGCCGGC AGCGGCACGC AGTTCGACAG CATCAAGCTC 
TGGCCGTTCA ACCAGACCAC GGAAGGGTGG ACGGGCAACG GTGCCCCGAC ACTCGTAGAC 
GGCTGGCTGC GGCCTGCCAA CCATGCCACT GCGCCGTGGG TACAGTCGCC GGTGGCGCTG 
GCCGTGGACG GCAGCGCATA CCGTTTCGTG AAGCTGCGCG TGAAGCGCGT GGGGTCTCCG 
ACGTGGAGCG GGTTCCTGCA GTGGATCACC GCCACGGACC AGGCATGGAA CACGCAGAAG 
CGTGCGGCTA TCCCGGAACC GGCGTGGGAC GCGAATGGCG TGGCCACGGT CGACGTGCAG 
GACATTGCCT GGTGGCCGGC CACGGTCGAT GCGATTCGCC TGCAGCTGGG GGCGGCGCAG 
ACTGTCGCCA ACTACTACCT GATCGACTAC ATCGCCGTCG GGCGCCCTCA GCCGGGTGCG 
TCGGTGGCGC TGGTGCAAGA GGAAACCCAA GCTCGGATCA CAGCAGACGC GGCCGAGGCC 
ACCCAACGCA CCGCACTGGC CGTGCAGATG CGAGGGAGCT ACACCGGAAC GGACCCGCTG 
CAGCTGACTG CGGGGCTGGC CTACGAGGAG CTGAAAGCCC GCGTGGCTGC CGACTCGGCG 
CAGGTGCAGC GCATCAGCAC GATGGAAGCC CGCATGCCGG TCGGCACCGG TTCGCTGGCA 
ACCGCGGCAT CGGTGACGGC GCTGCAGGAG GCCACCGCGA CCACCACCAG CGCGTTGGCG 
CAGTCGATCA CGACGATCAA CGCCACATTG CCGGCGATGA TTTCGCAGGG CGCCAGCATG 
GTCCTGAACG GCTCGTGGCA GTCCGGCAAG GATGTTGGCT GGACCTATGA CCCCGGAGCT 
ACTGGGACCA GCTGGCCGGC GACGGAGGGG CGCGCCGGTG GCATGTGTGT GCGCTTCGAC 
CCGGGGACCA TCCGGCAGAA GGCCGCGTAC GCCAATAGCA AAATGGTGAT GCCGACGAGC 
CCGGGCAAGA AGTACCGCTA CAGCTGCTGG TATCGCAGCA GCGCGGACTT CAATGGCACG 
CCCGGCAACA GCAAGATGCG GCTGTCGAAT CAGAACGAGG AGCTGATTGG CGGCGCGACG 
TTCTTCGTGG CTGACAAGTC CGCCTGGACA TACCTGAGCG CCGTTTACTC GATCCCGGAG 
AGCACGTCGA TCACCGGGTT GAAGCTGAGC ATCCTTGCCG ACAACACGGC GGGCACGCTG 
TGGGTTGACG ATGTTGCGAT GGAGGAGGTG ACCGAGCTGC TGGCGAATAC TCAGGCGATT 
TCGGACCTCA GCACGAAGGT GACCCAGCTG GACGGCACGG TCACGTCCCA GGCTGCGCAG 
CTGACGGTGC TTCGCAGCGA CCTTACCGGT GTTTCCGGGA GTACCGAAGC CAACACTACC 
GCATTGCAGC AGCTGACGAC GCGCGTCACC ACTGCCGAGG ACAAGATTGA GACGACCTCG 
CAGCAGATCA TCCAGCTGCA GACGGGCGTT GACGGGGTAA ATGCCAAGGC AGATTCGAAT 
TCCATTGCAA TCCAGGGGCT AACCGCGACA GTCACTCAAC AGGGCCAGAA ACTGGATGCG 
ACGGCTCAAG ATTTGACCAG CCTGAAGGCG CAGATTGGCG ACGTAAACGC CACCGCGTTC 
AGCCAGCTGA AGACCACGGC GAACCAGCAG GGCAGCAAGC TGGATGCGAC TGCGCAGGAC 
CTAGTAAGCC TGAAAACTCA GGTCGGGGAT GTATCGGCCA GCGGCTTCAA CCAGCTGAAA 
ACCGAGGTGA CGCAACAGGG ACAGACGCAG GCAGCACAAG GGCAGCAGAT CTCGGGCATT 
CAAACTTCGC TTGGCGGAAA GGCTGACGCA TCGGTCGTAC AGACGATGGA GGCCCGGGTG 
AAAACGTTGG GAGGTGGCGG CAATCTTCTA CGGACTGCAA CGATGACTGG ATCACTTAAT 
CCAGCGTGGT TTACGCGAAG TGCGTCTGGA AGCTGGGAGC GCTCGAATCT GATCCTCCAA 
GACGGTCGAG TTCCGCGAGG CATGAGGGCG ATGGTTCATT ACGCCAATGG TGGCCAGCCC 
ACTAACAGTC AGATTCTAAC GGCTCAGCAG ATCCCGGCAG AACCAGGGAA GTCCTACATG 
GGCTCGGTCT ACTGCAATTC GTATCTGGGT AGATCGAACA TCAGCGTCTT CTTCGTGGAC 
GCCAACGGAA ACCTGATCGG GTCTGAGTTT GCCTCGCCTG CCGGCAGGAG GTATGGGGCT 
AGCGGTTCTC TGGGTGACTA TGAGCGGTTG TTTGTCCGTA CAAATCCCGC ACCTGCAAAC 
GCTAGTACGG TCTGGTTCCA GATCGCCACA ACCAAGGAAT CCCCTGGGGG CCAAGACTGC 
GCAGGGTGGT ACGTGCAGCC GATGTTGGAG CAATGCCCAT CCGATGGCTC CTTGCCCTCC 
CTATGGTCTG CGGGCGGTAG TGAGGCGTTG GCGCAGTGGG GTGTGGATGT GCGTGCCGAC 
AAGAAGGTCG GTGGTGTGAC GCTGTCGGCT ACTGGCGAGG TGTCCGCGTT CGATGTGTTG 
GCCGACATGT TCCGTGTCTC ATCACCGACG GGCACCGGCG CGCGAACCGA GTACAGCGAT 
GGGACCTGGC GGGTGTATGA CGCCAAGAAC GTACTCCGCT TTCGTTGGGG TGTAGTGCCA 
TAA 

 

Protein sequence

MQARKLTLVE IGVGALPSAS PVAPRFSTWF PVPYKAPDVP PANGVSPTPV ADGVVLEWDA 
VDLEGVIYVI SRSESQDGPW TEIHRTTDTR YVYSDGSGKT WWFQITPTVR GKTGTGTVVG 
VVPPTTSKDL AEQQARLAEE IRARIQAIAD EAAARAAGLA QAAQDLVAEA LLRQQGVTEA 
MQAISAEAQA RIDALLNEKM EREAAISREE QLRQSADESL ARAVSEVAAG SGTQFDSIKL 
WPFNQTTEGW TGNGAPTLVD GWLRPANHAT APWVQSPVAL AVDGSAYRFV KLRVKRVGSP 
TWSGFLQWIT ATDQAWNTQK RAAIPEPAWD ANGVATVDVQ DIAWWPATVD AIRLQLGAAQ 
TVANYYLIDY IAVGRPQPGA SVALVQEETQ ARITADAAEA TQRTALAVQM RGSYTGTDPL 
QLTAGLAYEE LKARVAADSA QVQRISTMEA RMPVGTGSLA TAASVTALQE ATATTTSALA 
QSITTINATL PAMISQGASM VLNGSWQSGK DVGWTYDPGA TGTSWPATEG RAGGMCVRFD 
PGTIRQKAAY ANSKMVMPTS PGKKYRYSCW YRSSADFNGT PGNSKMRLSN QNEELIGGAT 
FFVADKSAWT YLSAVYSIPE STSITGLKLS ILADNTAGTL WVDDVAMEEV TELLANTQAI 
SDLSTKVTQL DGTVTSQAAQ LTVLRSDLTG VSGSTEANTT ALQQLTTRVT TAEDKIETTS 
QQIIQLQTGV DGVNAKADSN SIAIQGLTAT VTQQGQKLDA TAQDLTSLKA QIGDVNATAF 
SQLKTTANQQ GSKLDATAQD LVSLKTQVGD VSASGFNQLK TEVTQQGQTQ AAQGQQISGI 
QTSLGGKADA SVVQTMEARV KTLGGGGNLL RTATMTGSLN PAWFTRSASG SWERSNLILQ 
DGRVPRGMRA MVHYANGGQP TNSQILTAQQ IPAEPGKSYM GSVYCNSYLG RSNISVFFVD 
ANGNLIGSEF ASPAGRRYGA SGSLGDYERL FVRTNPAPAN ASTVWFQIAT TKESPGGQDC 
AGWYVQPMLE QCPSDGSLPS LWSAGGSEAL AQWGVDVRAD KKVGGVTLSA TGEVSAFDVL 
ADMFRVSSPT GTGARTEYSD GTWRVYDAKN VLRFRWGVVP