Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2466 |
Symbol | |
ID | 6476956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2769030 |
End bp | 2770220 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642731654 |
Product | efflux transporter, RND family, MFP subunit |
Protein accession | YP_002028852 |
Protein GI | 194366242 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCCG CACCACGCAA GCGCCGCCGA GCGCTCATGA TTGCTACCGC CCTGCTGTGC AGCGCACTGA TTCTGTTCGC ATGGTTGCGG CCGACACCAC CACCGCAATT GCAGGTTGCA CCCGTCGTTC GCGGCAACAT CGAACAGGTG GTGGAAGCCA CTGGCACGCT GAAGCCCTCG CGGCTGGTCA GCGTGGGTGC GCAGGTCTCC GGCCGCATCG ACACCCTGCA TGTGAAACTG GGCGACAAAG TGAAAGCCGG CGATCCCATC GCCGATATCG ATTCGCGCAC GCAGCGCAAT GCATTGCTGA GCGCGCAGGC CGCACAGCGC ACCGCGCGCG CCAACCGCGA TGCACTGGCG ACCGACCTGC GCCAGTTCGA GTTGACACTG CATCGGCAGC AGCAACTGGC TGCCGCGCAG CTGGTGGCCC GCGCCGACTT CGATGCAGCC AAGGCCAAGG TCGACGCCAC CCGTGAACAG ATCGCCGCAT TGGACGGTGA AGTTGCGCGC CGGCAGACCG ACGTTGATGT CGCGCAGACC AATCTGGAGT ACACCCGCAT CACTGCCCCC ACCGACGGCA CCGTACTGGC CGTGGTCGCG CGCCAGGGGC AGACCGTGAA TGCGGTGCAG AGCGCACCGA CCATCGTGAT GCTGGGCGAT CAGGACGTGA TGACGGTGTA CGCCGAGATC TCCGAGGCTG ACGTCGTACA CACCGCTGTT GGGCAGGAGG CGTTCTTCAC CATTCTTGGT GATGCCGGTC GGCGCTACAG CAGCAGGCTT CGAGATATAG CGCCAGCACC GGAATCGATC ACCAACGAAG ACAGTTCCAG CCTCGCCGCA CCGGCGGTGT CGGGTGGCAG CCGCACGGCC ATGTACTACA ACGGCCAGTT CGACGTGGAC AACGCTGATG GCCGCCTGCG CAGCTACATG ACCGCGCAGG TTCGCATCGT GCTGGGCCGC GCCAACGACG TACTGACCAT TCCCTCGGCC GCATTGGGTG CGCGCGCCGC CGATGGCAGC TACAGCGTGC AGATACGCGG TGCCGACGGT CGCGCCAGTG CGCGGCGCAT CACCACCGGG CTGGATGACC AGATCCAGGT GGAAGTACGC GACGGGCTGA AGGAAGGCGA ACAGGTCGTG CTGGCGCAGG CCAACGTCGA AGCCGCCAGC GCACCCGCGC AACCCAAATG A
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Protein sequence | MSAAPRKRRR ALMIATALLC SALILFAWLR PTPPPQLQVA PVVRGNIEQV VEATGTLKPS RLVSVGAQVS GRIDTLHVKL GDKVKAGDPI ADIDSRTQRN ALLSAQAAQR TARANRDALA TDLRQFELTL HRQQQLAAAQ LVARADFDAA KAKVDATREQ IAALDGEVAR RQTDVDVAQT NLEYTRITAP TDGTVLAVVA RQGQTVNAVQ SAPTIVMLGD QDVMTVYAEI SEADVVHTAV GQEAFFTILG DAGRRYSSRL RDIAPAPESI TNEDSSSLAA PAVSGGSRTA MYYNGQFDVD NADGRLRSYM TAQVRIVLGR ANDVLTIPSA ALGARAADGS YSVQIRGADG RASARRITTG LDDQIQVEVR DGLKEGEQVV LAQANVEAAS APAQPK
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