| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2448 |
|---|
| Symbol | |
|---|
| ID | 6476938 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2752488 |
|---|
| End bp | 2753543 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642731636 |
|---|
| Product | VirB8 family protein |
|---|
| Protein accession | YP_002028834 |
|---|
| Protein GI | 194366224 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3736] Type IV secretory pathway, component VirB8 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCGCA AGAAGGATCC CGGCAACAGT CCCAAGGTCG AGCAGTCGGT CGCCAAGGCG
GTCAGCTACG AGATCACCGT GGCCGACATG GCGCGTCGCA GCGAGCGTCG TGCCTGGTGG
GTCGCCACGG GCTCGCTGTT GATGTCGCTG GCATTGGCCG GTGGCTACTA CTACATGCTG
CCTCTGAAGG AGAAGGTGCC GTTCCTGGTG ATGGCCGACG CGTACACGGG TACCGCGACG
GTCGCGCGCC TGAGTGGCAC CTTCCAGGGC GAGACCATCA CCAGCAACGA AGCGATCAAT
CGCAGCAATG TGGCCCAGTA CGTGCTGGCG CGCGAGTCGT ACGACTCGGC GGTGATGGGC
CTGCGCGATT GGGAGCTGGT GTTCGTGATG TCCACCGATC CGGTGGCGCA GTCGATGCGC
GTGCGTTATG CCGGAAACAA TCCACAGAAC CCGTTCGTCA TGTACGGCCG CGAGCGCGCC
ATCCGGGTCA AGATCCTCAG CATCACGCCG CTGGGTGCTG AGCCGAATGG CAGCTTCCGC
GGTGCTTCGG TGCGTATCCA GCGCAGCCTG CTGGACAAGC GTACCGGCGT TGCCACTTAT
CTGGACAACC AGCTGGTGAC GATGCGCTTC GGCTACAACC AGAACCTGGC GCTGTCCGAA
CAGGATCGCA TCCTCAATCC GCTGGCCTTC CAGGTCACCG AGTACCGAGT CGACAACGAT
TATTCGCGTG GCGTACCGGT GCCGGATGAC GGCGCCATGC AGGCACAGGC GCAGCAGGCA
GCACAGGCCG CGCAGCAGGC CCAGGCGGCC TACGATCCCA ATAATCCGGC CGCAGCCACG
ATGATCGATC CGGCCACCGG CCAGCCGGTC GCCGTTCCGG CCAATGGCCA GGTGCCGGGT
CAGCCCGTGC AGGGCCAGCC GGTACAGGGG CAACCGATGC CGGCGCAGCC GGTGCCGGGT
CAAGCAACAC CGGGGCAGGC CATGCCCGGT CAGCCGGCCA TGAGGCCGGC GCAGAACAAT
TCCACCGGAA CTGCTGATGG AGCAAGCAAC CGATGA
|
|---|
| Protein sequence | MFRKKDPGNS PKVEQSVAKA VSYEITVADM ARRSERRAWW VATGSLLMSL ALAGGYYYML
PLKEKVPFLV MADAYTGTAT VARLSGTFQG ETITSNEAIN RSNVAQYVLA RESYDSAVMG
LRDWELVFVM STDPVAQSMR VRYAGNNPQN PFVMYGRERA IRVKILSITP LGAEPNGSFR
GASVRIQRSL LDKRTGVATY LDNQLVTMRF GYNQNLALSE QDRILNPLAF QVTEYRVDND
YSRGVPVPDD GAMQAQAQQA AQAAQQAQAA YDPNNPAAAT MIDPATGQPV AVPANGQVPG
QPVQGQPVQG QPMPAQPVPG QATPGQAMPG QPAMRPAQNN STGTADGASN R
|
|---|
| |